Different size of UMI region.

[josh4ever]

Hi there,

I like your software and want to use it for my samples. But they each have a different umi length.

Could you please advise?

Thank you.

[GildasLepennetier]

A bit late, but:
"In order to be able to run batch pipeline operations, all samples should contain UMI region of the same size"
-> I would suggest in this case to run the checkout-manual (https://migec.readthedocs.io/en/latest/checkout.html#checkout-manual) with only 1 sample in the barcode file. Separate the samples in different directories and use a specific barcode file for each.