Molecular Imaging / Magnetic Resonance Technology Lab
GitHub site for the Molecular Imaging / Magnetic Resonance Technology Lab (MIMRTL) in the Department of Radiology at the Univiersity of Wisconsin, Madison
University of Wisconsin, Madison
Pinned Repositories
BindNiftiImages
This script is a tool to bind multiple Nifti images into a single image by resampling each image to a common image space, as might be necessary for multi-region or whole-body imaging
DeepRad
DeepRad-Tools
DL_PDFFR2
MedML
MPRAGE_Simulator
Source code from the paper "Optimized Inversion-Prepared Gradient Echo Imaging" to perform extended phase graph simulation and contrast optimization on MP-RAGE MR images - https://pubmed.ncbi.nlm.nih.gov/22544758/
MRI-to-CT-Generation
sCT generation from 0.35T MRI images
NiftiGenerator
PETMR_Workshop_DL_Bootcamp
Repository for a deep learning bootcamp hosted at the October 2019 SNMMI-ISMRM PET/MR Workshop
Synthetic-CT-generation-from-NAC-PETMR
Synthetic CT generation from NAC PETMR images
Molecular Imaging / Magnetic Resonance Technology Lab's Repositories
mimrtl/DeepRad
mimrtl/PETMR_Workshop_DL_Bootcamp
Repository for a deep learning bootcamp hosted at the October 2019 SNMMI-ISMRM PET/MR Workshop
mimrtl/MedML
mimrtl/MPRAGE_Simulator
Source code from the paper "Optimized Inversion-Prepared Gradient Echo Imaging" to perform extended phase graph simulation and contrast optimization on MP-RAGE MR images - https://pubmed.ncbi.nlm.nih.gov/22544758/
mimrtl/Synthetic-CT-generation-from-NAC-PETMR
Synthetic CT generation from NAC PETMR images
mimrtl/BindNiftiImages
This script is a tool to bind multiple Nifti images into a single image by resampling each image to a common image space, as might be necessary for multi-region or whole-body imaging
mimrtl/DeepRad-Tools
mimrtl/DL_PDFFR2
mimrtl/Download-Large-File-From-Google-Drive-Using-Python
mimrtl/MRI-to-CT-Generation
sCT generation from 0.35T MRI images
mimrtl/NiftiGenerator
mimrtl/Radiation-Necrosis-Radiomics
Radiomics analysis used in the manuscript "Leveraging radiomics and machine learning to differentiate radiation necrosis from recurrence in patients with brain metastases" in the Journal of Neuro-Oncology
mimrtl/UW-CHTC-HTCondor-Examples
Example scripts for running HTCondor jobs on the University of Wisconsin Center for High Throughput Computing (CHTC) Resources