Pinned Repositories
data_tools
Tools for obtaining, manipulating, and visualizing data
disease-ontology
hetnet_ml
Software to quickly extract features from heterogeneous networks for machine learning.
metapaths
Augmenting a network to find metapaths that capture a Drugs MoA
n15_mice
Code accompanying the manuscript "Quantitative Metaproteomics and Activity-Based Probe Enrichment Reveals Significant Alterations in Protein Expression from a Mouse Model of Inflammatory Bowel Disease"
path_plots
A simple repo to quickly plot paths in a newtorkx graph
semmed
Code accompanying the manuscript "Time-resolved evaluation of compound repositioning predictions on a text-mined knowledge network"
wikidata
DrugMechDB
A database of paths that represent the mechanism of action from a drug to a disease in an indication.
WD-rephetio-analysis
mmayers12's Repositories
mmayers12/semmed
Code accompanying the manuscript "Time-resolved evaluation of compound repositioning predictions on a text-mined knowledge network"
mmayers12/data_tools
Tools for obtaining, manipulating, and visualizing data
mmayers12/disease-ontology
mmayers12/hetnet_ml
Software to quickly extract features from heterogeneous networks for machine learning.
mmayers12/metapaths
Augmenting a network to find metapaths that capture a Drugs MoA
mmayers12/n15_mice
Code accompanying the manuscript "Quantitative Metaproteomics and Activity-Based Probe Enrichment Reveals Significant Alterations in Protein Expression from a Mouse Model of Inflammatory Bowel Disease"
mmayers12/path_plots
A simple repo to quickly plot paths in a newtorkx graph
mmayers12/wikidata
mmayers12/basic-scripts
mmayers12/crossval
Cross validation for Project Rephetio
mmayers12/DrugMechDB
A database of paths that represent the mechanism of action from a drug to a disease in an indication.
mmayers12/genewikiworld
Generate a network of all items we care about, and some we don't....
mmayers12/integrate
Data integration for Project Rephetio
mmayers12/learn
mmayers12/learn-1
Machine learning for Project Rephetio
mmayers12/myvariant.info
MyVariant.info: Variant Annotation as a Service
mmayers12/rcfiles
rc and dot files from my various systems
mmayers12/rephetio-coord
Master coordinator of the rephetio project.
mmayers12/testworkflow
Testing some Github Action workflows
mmayers12/wd_property_paths
mmayers12/wl
Tools for analyzing weightlifting data
mmayers12/world_happiness
Analysis of World Happiness Dataset from Kaggle Competition