mnsmar

mnsmar's Stars

• maragkakislab/rnakinet-pub

  Language:Python1

• NIH-HPC/singularity-def-files

  definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster

  Language:Shell275

• nanoporetech/tombo

  Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.

  Language:Python22555

• mykeln/teslaprep

  A comprehensive guide on buying and owning a Tesla

  908192

• yunabe/lgo

  Interactive Go programming with Jupyter

  Language:Go2.4k122

• snakemake/snakemake

  This is the development home of the workflow management system Snakemake. For general information, see

  Language:HTML2.2k524

• kundajelab/idr

  IDR

  Language:Python294

• AlDanial/cloc

  cloc counts blank lines, comment lines, and physical lines of source code in many programming languages.

  Language:Perl18.9k1k

• nanoporetech/pipeline-transcriptome-de

  Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads

  Language:Python10625

• jianhong/trackViewer

  A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot

  Language:R5913

• dgryski/go-perfbook

  Thoughts on Go performance optimization

  10.6k596

• nanopore-wgs-consortium/NA12878

  Data and analysis for NA12878 genome on nanopore

  Language:Python37293

• statgen/pheweb

  A tool to build a website to browse hundreds or thousands of GWAS.

  Language:Python15465

• photoprism/photoprism

  AI-Powered Photos App for the Decentralized Web 🌈💎✨

  Language:Go33.6k1.8k

• influxdata/influxql

  Package influxql implements a parser for the InfluxDB query language.

  Language:Go16648

• sourcegraph/go-langserver

  Go language server to add Go support to editors and other tools that use the Language Server Protocol (LSP)

  Language:Go1.2k90

• junegunn/fzf

  :cherry_blossom: A command-line fuzzy finder

  Language:Go62k2.3k

• brentp/bigly

  a pileup library that embraces the huge

  Language:Go425

• google/deepvariant

  DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

  Language:Python3.1k703

• Hoohm/dropSeqPipe

  A SingleCell RNASeq pre-processing snakemake workflow

  Language:Python14646

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3k936

• shenwei356/brename

  A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression

  Language:Go25521

• qax-os/goreporter

  A Golang tool that does static analysis, unit testing, code review and generate code quality report.

  Language:Go3.1k270

• go-nv/goenv

  :blue_car: Like pyenv and rbenv, but for Go.

  Language:Shell2k245

• jdrudolph/goenrich

  GO enrichment with python -- pandas meets networkx

  Language:Python8722

• tanghaibao/goatools

  Python library to handle Gene Ontology (GO) terms

  Language:Python745212

• benbjohnson/testing

  A small collection of functions for Go testing.

  Language:Go52737

• alexflint/go-arg

  Struct-based argument parsing in Go

  Language:Go1.9k98

• avelino/awesome-go

  A curated list of awesome Go frameworks, libraries and software

  Language:Go125k11.7k

• genetics-statistics/GEMMA

  Genome-wide Efficient Mixed Model Association

  Language:C++313122