Pinned Repositories
AF2_benchmark
Allocator-RNA
alphaflow
AlphaFold Meets Flow Matching for Generating Protein Ensembles
alphafold
Open source code for AlphaFold.
alphafold3
AlphaFold 3 inference pipeline.
AMAS
Calculate summary statistics and manipulate multiple sequence alignments
kaggle-api
Official Kaggle API
openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
RLDOCK
warp-ctc
Fast parallel CTC.
modelturnedgeek's Repositories
modelturnedgeek/EternaBench
Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.
modelturnedgeek/deepchain-apps
A library for deploying App on deepchain.bio
modelturnedgeek/CDSfold
modelturnedgeek/DeepEvolve
Rapid hyperparameter discovery for neural nets using genetic algorithms
modelturnedgeek/seqprop
Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor
modelturnedgeek/opendata4covid19
Korean COVID-19 data extraction
modelturnedgeek/Vfold2d_v2.5
Vfold2d (version 2.5) by Shi-Jie Chen Research Group
modelturnedgeek/lineardpparser
linear-time dynamic programming dependency parser
modelturnedgeek/warp-ctc
Fast parallel CTC.
modelturnedgeek/gpu-workshop-2014
repository for materials for Chris Paciorek's workshop on GPU computation, April 2014