Can this tool be used to analyse human data?

[Jokendo-collab]

Hi,

I find your tool relevant to my RNAseq data even though I have human RNAseq data. Can I use it fo the analysis of my data or it is purely meant for the use with non-human data as stated in the paper?

[madetunj]

Hi Javan,
Thank you for your interest in VAP.
The pipeline was tested and validated using non-human samples, however the methodology of using multiple mappers can be applicable as a sequencing-quality filter to human data as well.

Best,
Modupe

[Jokendo-collab]

So it's safe to use it for human data because your pipeline is clean and easy to use? The coding you did was great Thanks for clarification on this

…

On Tue, May 5, 2020 at 11:03 PM Modupeore Adetunji ***@***.***> wrote: Hi Javan, Thank you for your interest in VAP. The pipeline was tested and validated using non-human samples, however the methodology of using multiple mappers can be applicable as a sequencing-quality filter to human data as well. Best, Modupe — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#4 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AGJ34O3G3XGXTR36XP47LQLRQB5LPANCNFSM4MZFB4LQ> .

[madetunj]

Yes it is. Glad to help.