msk-access/biometrics

Issues

• extract raises an error if optional sites vcf input is not passed

  #50 opened a year ago by jethror1
  0

• issues with handling one sample at low coverage

  #46 opened 3 years ago by murphycj2
  0

• add column for predicted group

  #24 opened 3 years ago by murphycj2
  1

• rename extraction files from .pk to .pickle

  #40 opened 3 years ago by murphycj2
  1

• extract tool not properly multi-threading

  #41 opened 3 years ago by murphycj2
  1

• github action for docker build/release

  #30 opened 3 years ago by murphycj2
  1

• more flexible inputs for CLI

  #26 opened 3 years ago by murphycj2
  0

• make database arg not required

  #27 opened 3 years ago by murphycj2
  1

• optionally output file for each sample containing its pairwise comparisons

  #25 opened 3 years ago by murphycj2
  0

• parallelize loading of extraction results

  #23 opened 3 years ago by murphycj2
  0

• compute minor/major contamination during extraction using reasonable defaults

  #22 opened 3 years ago by murphycj2
  0

• don't automatically cluster all the database samples when using genotype tool

  #21 opened 3 years ago by murphycj2
  0

• when clustering input, also include any samples that match in the database

  #20 opened 3 years ago by murphycj2
  0

• Minor Contamination Plots (Duplex and Unfiltered)

  #9 opened 4 years ago by rhshah
  1

• Automation of Inference for Unexpected Matches and Mismatches

  #11 opened 4 years ago by rhshah
  0

• Test Duplex Minor Contamination

  #12 opened 4 years ago by rhshah
  0

• Testing how Multiple Assays can be run for Fingerprint analysis

  #13 opened 4 years ago by rhshah
  0

• Inference based on Unexpected Match and Unexpected Mismatch

  #10 opened 4 years ago by rhshah
  0

• Genotyping

  #1 opened 4 years ago by rhshah
  0

• Minor Contamination

  #2 opened 4 years ago by rhshah
  0

• Major Contamination

  #3 opened 4 years ago by rhshah
  0

• Sex Mismatch

  #4 opened 4 years ago by rhshah
  0