murphycj2

MSKCC

Pinned Repositories

access_data_analysis
Scripts for downstream analysis plotting of pipeline output
Language:R7 8 250
access_qc_generation
Generation Quality Controls Files for MSK-ACCESS
Language:Common Workflow Language1 2 61
access_utils
Miscelaneous Scripts for MSK-ACCESS workflows
Language:Python0 2 30
biometrics
Python package to calculate various sample contamination metrics.
Language:Python6 3 222
cwl_subworkflows
A list of subworkflows used for MSK-ACCESS data processing.
Language:Common Workflow Language2 10 71
genotype_variants
Project to genotype SNV, INDEL and SV.
Language:Python1 2 14
sequence_qc
Noise calculations from BAM file
Language:Python0 2 160
msk_lib
Misc. tools that may be useful for others at MSK.
Language:Python01

murphycj2/msk_lib
Misc. tools that may be useful for others at MSK.
Language:Python01