Pinned Repositories
acc
Accelerated mcvine engine
assumeng
TestNG Assumptions
bio-formats-build
Bio-Formats top-level build for all components
bio-formats-documentation
Bio-Formats documentation
bioformats
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
blog
The OME Blog
build-infra
Infrastructure for super-project builds
commonmark-spec
CommonMark spec, with reference implementations in C and JavaScript
conda-omero-py
OMERO.py Conda package
openmicroscopy
OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded by private and public research grants, OME has been a major force on the international microscopy stage since 2000.
mtbc's Repositories
mtbc/bioformats
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
mtbc/bio-formats-build
Bio-Formats top-level build for all components
mtbc/bio-formats-documentation
Bio-Formats documentation
mtbc/build-infra
Infrastructure for super-project builds
mtbc/deployment
Deployment infrastructure for the Image Data Resource
mtbc/devspace
mtbc/idr.openmicroscopy.org
Source for the IDR website.
mtbc/ome-common-java
Java library providing common functionality for all OME Java components
mtbc/ome-model
OME model (specification, code generator, implementation)
mtbc/omero-api-plugin
mtbc/omero-artifact-plugin
Gradle plugin responsible for adding common build logic for publishing omero artifacts
mtbc/omero-cli-render
OMERO command-line tool for rendering
mtbc/omero-dropbox
OMERO.dropbox server for watching directories
mtbc/omero-dsl-plugin
Build tool for generating code in OMERO
mtbc/omero-gallery
mtbc/omero-iviewer
An OMERO.web app allowing to view images
mtbc/omero-javapackager-plugin
Plugin for creating an installable java package (dmg, exe, etc.) using javapackager command line tool
mtbc/omero-matlab
Toolbox for accessing OMERO from MATLAB
mtbc/omero-metadata
OMERO plugin for metadata manipulation https://www.openmicroscopy.org/omero/
mtbc/omero-model
Gradle project for generating model jar for OMERO
mtbc/omero-ms-zarr
Experimental micro-service for implementing the Zarr spec over HTTP
mtbc/omero-plugins
Collection of OMERO extensions (plugins, apps)
mtbc/omero-py
Python project containing Ice remoting code for OMERO
mtbc/omero-signup
OMERO.web app to allow anyone to signup for an OMERO account
mtbc/omero-web
Django-based OMERO.web client
mtbc/OMERO.forms
Extension to OMERO.web to enhance metadata input and provide provenance
mtbc/presentations
HTML-based presentations from the OME team.
mtbc/rOMERO-gateway
OMERO R Gateway
mtbc/virtual-microscope
Virtual Microscope OMERO.web extension application
mtbc/VizAly-Foresight
A compression benchmark suite