neksa/mutagene

provides no list of cohorts

Opened this issue · 1 comments

$ mutagene fetch cohorts --list
WARNING Looks like the file has been downloaded already: cohorts.tar.gz

neksa commented

The issue is that for fetch cohorts COSMIC is the default source, so it's literally interpreted as
fetch cohorts COSMIC --list

a workaround is:

mutagene fetch cohorts MSKCC --list