Pinned Repositories
mccortex
De novo genome assembly and multisample variant calling
BitArray
C bit array structs and methods
jelly-hash
Low memory multithreaded hash table
msg-pool
Multiple Producers / Multiple Consumers Message Passing Pool
pyRBT
Red Black Tree in Python
seq-align
Fast, portable C implementations of Needleman-Wunsch and Smith-Waterman sequence alignment
seq_file
Library for Reading Bioinformatic Sequence Data in C
sort_r
Portable qsort_r / qsort_s
string_buffer
libstrbuf: A powerful string library for C
noporpoise's Repositories
noporpoise/BitArray
C bit array structs and methods
noporpoise/seq-align
Fast, portable C implementations of Needleman-Wunsch and Smith-Waterman sequence alignment
noporpoise/sort_r
Portable qsort_r / qsort_s
noporpoise/jelly-hash
Low memory multithreaded hash table
noporpoise/msg-pool
Multiple Producers / Multiple Consumers Message Passing Pool
noporpoise/string_buffer
libstrbuf: A powerful string library for C
noporpoise/seq_file
Library for Reading Bioinformatic Sequence Data in C
noporpoise/carrays
Algorithms that work on generic C arrays
noporpoise/madcrowlib
Common C data structure macros
noporpoise/UtilityLibrary
C Code for Good Housekeeping
noporpoise/biogrok
Bash scripts for everyday bioinformatics
noporpoise/CortexLib
Library code for handling data from the cortex variant caller
noporpoise/readsim
Simulate DNA sequencing reads using real reads
noporpoise/bioinf-perl
Perl libraries and scripts for everyday bioinformatics tasks, including VCF, FASTA & FASTQ handling
noporpoise/cortex_binary_reader
Read cortex graph files (historic page, use McCortex view instead)
noporpoise/cpp_priority_heap
Simple priority heap with updatable priorities in c++11
noporpoise/GenomeDensity
Density of events around objects on a genome
noporpoise/pyRBT
Red Black Tree in Python
noporpoise/strtools
Small command line tools for manipulating strings
noporpoise/thumper
A small tool to check file systems
noporpoise/vcf-hack
Hack-y C programs for modifying VCF files
noporpoise/vcf-slim
Light weight VCF annotation and filtering
noporpoise/dotfiles
Useful bash scripts for your .profile file
noporpoise/GFA-spec
Graphical Fragment Assembly (GFA) Format Specification
noporpoise/htslib
C library for high-throughput sequencing data formats
noporpoise/htslib-test
noporpoise/tensorflow
Computation using data flow graphs for scalable machine learning