nygenome/lancet

Lancet use cases

pdimens opened this issue · 2 comments

Is it possible to use Lancet for linked-read SNV calling on non-tumor samples?

Lancet requires a matching (normal) sample. In the absence of that, you can try providing the same sample twice. This is not a recommended mode of usage, but all the variants should be called as "shared".

Ah, thank you for the information.