Help match HPO and MP EQs
rays22 opened this issue · 2 comments
rays22 commented
Some MP terms already have Equivalent Class axioms, while the exactly matching HPO term does not have any.
The same is true for some HPO-MP matching term pairs.
- Create a table to help axiomatise HPO and MP terms. The EQ from one ontology of a matching term pair can be used in the other ontology for the matching term if it did not already exist.
- Use exact or close matches from Mouse-Human Ontology Mapping Initiative (MHMI) table mh_mapping_initiative/mappings/mp_hp_mgi_all.sssom.tsv
- Extract the Equivalent Class axioms from HPO and MP.
robot export --input ontology-edit.owl --header "ID|LABEL|Equivalent Class" --include "classes properties" --export ontology-edit.owl-EQs.tsv
- Create a table of HP-MP matching terms and the EQs where available.
rays22 commented
A table with mapped 321 HPO-MP terms and EQs
has four groups:
- Both HPO and the matching MP term have EQs, but the EQs differ. These 80 pairs need manual alignment.
- Only the MP term has an EQ.
- Only the HPO term has an EQ.
- No EQ for either.
Mappings Table
| HP ID | HP LABEL | HP EQ | MP ID | MP LABEL | MP EQ | group |
|---|---|---|---|---|---|---|
| HP:0003307 | Hyperlordosis | has part' some ('curved ventral' and ('characteristic of' some 'vertebral column') and ('has modifier' some abnormal) and ('has modifier' some pathological)) | MP:0000162 | lordosis | has part' some ('curved rostral' and ('characteristic of' some 'vertebral column') and ('has modifier' some abnormal) and ('has modifier' some pathological)) | disagree (to be reviewed) |
| HP:0012417 | Hypocapnia | has part' some ('decreased amount' and ('characteristic of' some ('carbon dioxide' and ('part of' some blood))) and ('has modifier' some abnormal)) | MP:0003032 | hypocapnia | has part' some ('decreased amount' and ('characteristic of' some 'carbon dioxide') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0040303 | Decreased serum iron | has part' some ('decreased amount' and ('characteristic of' some ('iron atom' and ('part of' some 'blood serum'))) and ('has modifier' some abnormal)) | MP:0004151 | decreased circulating iron level | has part' some ('decreased amount' and ('characteristic of' some ('iron atom' and ('part of' some blood))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002900 | Hypokalemia | has part' some ('decreased amount' and ('characteristic of' some ('potassium atom' and ('part of' some blood))) and ('has modifier' some abnormal)) | MP:0004119 | hypokalemia | has part' some ('decreased amount' and ('characteristic of' some blood) and (towards some 'potassium atom') and ('has modifier' some abnormal) and ('has modifier' some pathological)) | disagree (to be reviewed) |
| HP:0031831 | Decreased serum zinc | has part' some ('decreased amount' and ('characteristic of' some ('zinc atom' and ('part of' some 'blood serum'))) and ('has modifier' some abnormal)) | MP:0031172 | decreased circulating zinc level | has part' some ('decreased amount' and ('characteristic of' some ('zinc atom' and ('part of' some blood))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0031891 | Decreased eosinophil count | has part' some ('decreased amount' and ('characteristic of' some (eosinophil and ('part of' some blood))) and ('has modifier' some abnormal)) | MP:0005012 | decreased eosinophil cell number | has part' some ('decreased amount' and ('characteristic of' some eosinophil) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001882 | Leukopenia | has part' some ('decreased amount' and ('characteristic of' some (leukocyte and ('part of' some blood))) and ('has modifier' some abnormal)) | MP:0000221 | decreased leukocyte cell number | has part' some ('decreased amount' and ('characteristic of' some leukocyte) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001888 | Lymphopenia | has part' some ('decreased amount' and ('characteristic of' some (lymphocyte and ('part of' some blood))) and ('has modifier' some abnormal)) | MP:0005016 | decreased lymphocyte cell number | has part' some ('decreased amount' and ('characteristic of' some lymphocyte) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001943 | Hypoglycemia | has part' some ('decreased amount' and ('characteristic of' some blood) and (towards some glucose) and ('has modifier' some abnormal) and ('has modifier' some pathological)) | MP:0005560 | decreased circulating glucose level | has part' some ('decreased amount' and ('characteristic of' some (glucose and ('part of' some blood))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001638 | Cardiomyopathy | has part' some ('decreased functionality' and ('characteristic of' some myocardium) and ('has modifier' some abnormal)) | MP:0005330 | cardiomyopathy | has part' some ('increased amount' and ('characteristic of' some cardiomyopathy) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002615 | Hypotension | has part' some ('decreased pressure' and ('characteristic of' some (blood and ('part of' some 'blood vessel'))) and ('has modifier' some abnormal) and ('has modifier' some chronic)) | MP:0001596 | hypotension | has part' some ('decreased pressure' and ('characteristic of' some blood) and ('characteristic of part of' some 'blood vessel') and ('has modifier' some abnormal) and ('has modifier' some chronic)) | disagree (to be reviewed) |
| HP:0001635 | Congestive heart failure | has part' some ('decreased rate' and ('characteristic of' some 'heart contraction') and ('has modifier' some abnormal)) | MP:0006138 | congestive heart failure | has part' some ('decreased amount' and ('characteristic of' some 'heart contraction') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0004409 | Hyposmia | has part' some ('decreased sensitivity of a process' and ('characteristic of' some 'sensory perception of smell') and ('has modifier' some abnormal)) | MP:0008544 | impaired olfaction | has part' some ('decreased rate' and ('characteristic of' some 'sensory perception of smell') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001252 | Muscular hypotonia | has part' some ('decreased tonicity' and ('characteristic of' some 'muscle organ') and ('has modifier' some abnormal)) | MP:0004144 | hypotonia | has part' some ('decreased tonicity' and ('characteristic of' some 'muscle organ') and ('has modifier' some abnormal) and ('has modifier' some pathological)) | disagree (to be reviewed) |
| HP:0000958 | Dry skin | has part' some ('decreased water composition' and ('characteristic of' some 'skin of body') and ('has modifier' some abnormal)) | MP:0003853 | dry skin | has part' some ('decreased water composition' and ('characteristic of' some 'zone of skin') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000402 | Stenosis of the external auditory canal | has part' some ('decreased width' and ('characteristic of' some 'external acoustic meatus') and ('has modifier' some abnormal)) | MP:0031285 | external auditory canal stenosis | has part' some (constricted and ('characteristic of' some 'external acoustic meatus') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002948 | Vertebral fusion | has part' some ('fused with' and ('characteristic of' some vertebra) and (towards some 'bony vertebral centrum') and ('has modifier' some abnormal)) | MP:0004609 | vertebral fusion | has part' some ('fused with' and ('characteristic of' some vertebra) and (towards some vertebra) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0040223 | Pulmonary hemorrhage | has part' some ('having extra processual parts' and (towards some ('hemorrhage and non-specified extravasation' and ('part of' some lung))) and ('has modifier' some abnormal)) | MP:0001182 | lung hemorrhage | has part' some ('increased amount' and ('characteristic of part of' some ('hemorrhage and non-specified extravasation' and ('occurs in' some lung))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001537 | Umbilical hernia | has part' some ('herniated into' and ('characteristic of part of' some 'abdominal viscera') and (towards some umbilicus) and ('has modifier' some abnormal)) | MP:0010146 | umbilical hernia | has part' some (herniated and ('characteristic of' some 'umbilical cord') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0003155 | Elevated circulating alkaline phosphatase concentration | has part' some ('increased amount' and ('characteristic of' some 'alkaline phosphatase, tissue-nonspecific isozyme') and ('has modifier' some abnormal)) | MP:0002968 | increased circulating alkaline phosphatase level | has part' some ('increased amount' and ('characteristic of' some ('alkaline phosphatase, tissue-nonspecific isozyme' and ('part of' some blood))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0012416 | Hypercapnia | has part' some ('increased amount' and ('characteristic of' some ('carbon dioxide' and ('part of' some blood))) and ('has modifier' some abnormal)) | MP:0002318 | hypercapnia | has part' some ('increased amount' and ('characteristic of' some 'carbon dioxide') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001941 | Acidosis | has part' some ('increased amount' and ('characteristic of' some ('chemical entity' and ('part of' some 'bodily fluid') and ('has role' some acid))) and ('has modifier' some abnormal)) | MP:0003031 | acidosis | has part' some ('increased amount' and ('characteristic of' some ('chemical entity' and ('has role' some acid) and ('part of' some 'bodily fluid'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001342 | Cerebral hemorrhage | has part' some ('increased amount' and ('characteristic of' some ('hemorrhage and non-specified extravasation' and ('part of' some brain))) and ('has modifier' some abnormal)) | MP:0001916 | intracerebral hemorrhage | has part' some ('increased amount' and ('characteristic of' some ('hemorrhage and non-specified extravasation' and ('part of' some 'cerebral hemisphere'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0025439 | Pharyngitis | has part' some ('increased amount' and ('characteristic of' some ('inflammatory response' and ('occurs in' some 'chordate pharynx'))) and ('has modifier' some abnormal)) | MP:0031095 | pharyngitis | has part' some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some 'chordate pharynx'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0012819 | Myocarditis | has part' some ('increased amount' and ('characteristic of' some ('inflammatory response' and ('occurs in' some myocardium))) and ('has modifier' some abnormal)) | MP:0001856 | myocarditis | has part' some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some myocardium))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000093 | Proteinuria | has part' some ('increased amount' and ('characteristic of' some ('protein polypeptide chain' and ('part of' some urine))) and ('has modifier' some abnormal)) | MP:0002962 | increased urine protein level | has part' some ('increased amount' and ('characteristic of' some (protein and ('part of' some urine))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0004942 | Aortic aneurysm | has part' some ('increased amount' and ('characteristic of' some (aneurysm and ('part of' some aorta)))) | MP:0006278 | aortic aneurysm | has part' some ('increased amount' and ('characteristic of' some (aneurysm and ('part of' some aorta))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000790 | Hematuria | has part' some ('increased amount' and ('characteristic of' some (blood and ('part of' some urine))) and ('has modifier' some abnormal)) | MP:0005161 | hematuria | has part' some ('increased amount' and ('characteristic of' some (erythrocyte and ('part of' some urine))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0003259 | Elevated circulating creatinine concentration | has part' some ('increased amount' and ('characteristic of' some (creatinine and ('part of' some 'blood serum'))) and ('has modifier' some abnormal)) | MP:0010064 | increased circulating creatine level | has part' some ('increased amount' and ('characteristic of' some (creatine and ('part of' some blood))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002151 | Increased serum lactate | has part' some ('increased amount' and ('characteristic of' some (lactate and ('part of' some 'blood serum'))) and ('has modifier' some abnormal)) | MP:0013405 | increased circulating lactate level | has part' some ('increased amount' and ('characteristic of' some (lactate and ('part of' some blood))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001974 | Leukocytosis | has part' some ('increased amount' and ('characteristic of' some (leukocyte and ('part of' some blood))) and ('has modifier' some abnormal)) | MP:0000218 | increased leukocyte cell number | has part' some ('increased amount' and ('characteristic of' some leukocyte) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002633 | Vasculitis | has part' some ('increased amount' and ('characteristic of' some (vasculitis and ('part of' some 'blood vessel'))) and ('has modifier' some abnormal)) | MP:0001863 | blood vessel inflammation | has part' some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some 'blood vessel'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0003074 | Hyperglycemia | has part' some ('increased amount' and ('characteristic of' some blood) and (towards some glucose) and ('has modifier' some abnormal) and ('has modifier' some pathological)) | MP:0005559 | increased circulating glucose level | has part' some ('increased amount' and ('characteristic of' some (glucose and ('part of' some blood))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000122 | Unilateral renal agenesis | has part' some ('increased amount' and ('characteristic of' some kidney) and ('has modifier' some abnormal) and ('has modifier' some unilateral)) | MP:0003604 | single kidney | has part' some ('decreased amount' and ('characteristic of' some kidney) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0003470 | Paralysis | has part' some ('increased amount' and ('characteristic of' some paralysis) and ('has modifier' some abnormal)) | MP:0000753 | paralysis | has part' some (paralysed and ('characteristic of' some 'organism subdivision') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000268 | Dolichocephaly | has part' some ('increased anterior-posterior diameter' and ('characteristic of' some head) and ('has modifier' some abnormal)) | MP:0003742 | narrow head | has part' some ('decreased width' and ('characteristic of' some head) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002659 | Increased susceptibility to fractures | has part' some ('increased fragility' and ('characteristic of' some 'bone element') and ('has modifier' some abnormal)) | MP:0000061 | fragile skeleton | has part' some (fragile and ('characteristic of' some 'skeletal system') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002789 | Tachypnea | has part' some ('increased rate' and ('characteristic of' some 'respiratory gaseous exchange by respiratory system') and ('has modifier' some 'severe intensity') and ('has modifier' some abnormal)) | MP:0005426 | tachypnea | has part' some ('increased frequency' and ('characteristic of' some 'respiratory gaseous exchange by respiratory system') and ('has modifier' some 'severe intensity') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001287 | Meningitis | has part' some ('increased rate' and ('characteristic of' some ('inflammatory response' and ('occurs in' some 'meningeal cluster'))) and ('has modifier' some abnormal)) | MP:0031110 | meningitis | has part' some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some 'meningeal cluster'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0012486 | Myelitis | has part' some ('increased rate' and ('characteristic of' some ('inflammatory response' and ('occurs in' some 'spinal cord'))) and ('has modifier' some abnormal)) | MP:0030987 | spinal cord inflammation | has part' some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some 'spinal cord'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000123 | Nephritis | has part' some ('increased rate' and ('characteristic of' some ('inflammatory response' and ('occurs in' some kidney))) and ('has modifier' some abnormal)) | MP:0001859 | kidney inflammation | has part' some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some kidney))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002090 | Pneumonia | has part' some ('increased rate' and ('characteristic of' some ('inflammatory response' and ('occurs in' some lung))) and ('has modifier' some abnormal)) | MP:0001861 | lung inflammation | has part' some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some lung))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0100614 | Myositis | has part' some ('increased rate' and ('characteristic of' some ('inflammatory response' and ('occurs in' some musculature))) and ('has modifier' some abnormal)) | MP:0004510 | myositis | has part' some ('increased amount' and ('characteristic of' some myositis) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001701 | Pericarditis | has part' some ('increased rate' and ('characteristic of' some ('inflammatory response' and ('occurs in' some pericardium))) and ('has modifier' some abnormal)) | MP:0001845 | pericarditis | has part' some (quality and ('characteristic of part of' some 'inflammatory response') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0011675 | Arrhythmia | has part' some ('irregular rhythm' and ('characteristic of' some 'heart contraction') and ('has modifier' some abnormal)) | MP:0001636 | irregular heartbeat | has part' some ('irregular rhythm' and ('characteristic of part of' some 'heart contraction') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001284 | Areflexia | has part' some ('lacking processual parts' and ('characteristic of' some reflex) and ('has modifier' some abnormal)) | MP:0031122 | areflexia | has part' some (absent and ('characteristic of' some reflex) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001363 | Craniosynostosis | has part' some ('premature closure' and ('characteristic of' some 'skeletal joint') and ('has modifier' some abnormal)) | MP:0000081 | premature cranial suture closure | has part' some ('premature closure' and ('characteristic of' some 'cranial suture') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000708 | Behavioral abnormality | has part' some ('process quality' and ('characteristic of' some 'behavior process') and ('has modifier' some abnormal)) | MP:0004924 | abnormal behavior | has part' some (quality and ('characteristic of' some 'behavior process') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002084 | Encephalocele | has part' some ('protruding out of' and ('characteristic of' some (tissue and ('part of' some brain))) and (towards some skull) and ('has modifier' some abnormal)) | MP:0012260 | encephalomeningocele | has part' some ('protruding out of' and (('characteristic of' some (tissue and ('part of' some brain) and ('part of' some 'brain meninx'))) and (towards some skull) and ('has modifier' some abnormal))) | disagree (to be reviewed) |
| HP:0001651 | Dextrocardia | has part' some ('right side of' and ('characteristic of' some heart) and (towards some chest) and ('has modifier' some abnormal)) | MP:0000644 | dextrocardia | has part' some ('right side of' and ('characteristic of' some chest) and (towards some heart) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001159 | Syndactyly | has part' some ('Toe syndactyly' or 'Finger syndactyly') | MP:0000564 | syndactyly | has part' some ('fused with' and ('characteristic of' some digit) and (towards some digit) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000528 | Anophthalmia | has part' some (absent and ('characteristic of' some 'eyeball of camera-type eye') and ('has modifier' some abnormal)) | MP:0001293 | anophthalmia | has part' some (absent and ('characteristic of' some 'camera-type eye') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001663 | Ventricular fibrillation | has part' some (asynchronous and ('characteristic of' some 'cardiac muscle contraction') and ('characteristic of' some 'cardiac ventricle') and ('has modifier' some abnormal)) | MP:0006110 | ventricular fibrillation | has part' some (asynchronous and ('characteristic of' some ('cardiac muscle contraction' and ('occurs in' some 'cardiac ventricle'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000413 | Atresia of the external auditory canal | has part' some (atretic and ('characteristic of' some 'external acoustic meatus') and ('has modifier' some abnormal)) | MP:0009707 | absent external auditory canal | has part' some (absent and ('characteristic of' some 'external acoustic meatus') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000453 | Choanal atresia | has part' some (atretic and ('characteristic of' some 'posterior nasal aperture') and ('has modifier' some abnormal)) | MP:0008970 | choanal atresia | has part' some (atretic and ('characteristic of' some 'internal naris') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000698 | Conical tooth | has part' some (conical and ('characteristic of' some dentition) and ('has modifier' some abnormal)) | MP:0030499 | conical tooth | has part' some (conical and ('characteristic of' some 'calcareous tooth') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002021 | Pyloric stenosis | has part' some (constricted and ('characteristic of' some 'pyloric antrum') and ('has modifier' some abnormal)) | MP:0003307 | pyloric stenosis | has part' some (constricted and ('characteristic of' some pylorus) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0010674 | Abnormality of the curvature of the vertebral column | has part' some (curvature and ('characteristic of part of' some 'vertebral column') and ('has modifier' some abnormal)) | MP:0004174 | abnormal spine curvature | has part' some (curvature and ('characteristic of' some 'vertebral column') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000961 | Cyanosis | has part' some (cyan and ('characteristic of' some 'skin of body') and ('has modifier' some abnormal)) | MP:0001575 | cyanosis | has part' some (cyan and ('characteristic of' some 'zone of skin') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002181 | Cerebral edema | has part' some (edematous and ('characteristic of part of' some telencephalon) and ('has modifier' some abnormal)) | MP:0011854 | cerebral edema | has part' some (edematous and ('characteristic of' some brain) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002206 | Pulmonary fibrosis | has part' some (fibrotic and ('characteristic of' some lung) and ('has modifier' some abnormal)) | MP:0003426 | pulmonary interstitial fibrosis | has part' some ('increased amount' and ('characteristic of' some (fibrosis and ('part of' some 'lung connective tissue'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0012795 | Abnormality of the optic disc | has part' some (morphology and ('characteristic of part of' some 'optic disc') and ('has modifier' some abnormal)) | MP:0008259 | abnormal optic disk morphology | has part' some (quality and ('characteristic of' some 'optic disc') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001999 | Abnormal facial shape | has part' some (morphology and ('characteristic of' some face) and ('has modifier' some abnormal)) | MP:0030071 | abnormal face shape | has part' some (shape and ('characteristic of' some face) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0002605 | Hepatic necrosis | has part' some (necrotic and ('characteristic of part of' some liver) and ('has modifier' some abnormal)) | MP:0001654 | hepatic necrosis | has part' some ('increased amount' and ('characteristic of part of' some ('necrotic cell death' and ('occurs in' some liver))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001700 | Myocardial necrosis | has part' some (necrotic and ('characteristic of part of' some myocardium) and ('has modifier' some abnormal)) | MP:0006085 | myocardium necrosis | has part' some ('increased amount' and ('characteristic of part of' some ('necrotic cell death' and ('occurs in' some myocardium))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001742 | Nasal obstruction | has part' some (obstructed and ('characteristic of part of' some nose) and ('has modifier' some abnormal)) | MP:0031101 | nasal obstruction | has part' some (obstructed and ('characteristic of' some 'nasal cavity') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0004307 | Abnormal anatomic location of the heart | has part' some (position and ('characteristic of part of' some heart) and ('has modifier' some abnormal)) | MP:0006065 | abnormal heart position or orientation | has part' some (position and ('characteristic of' some heart) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000520 | Proptosis | has part' some (protruding and ('characteristic of' some 'eyeball of camera-type eye') and ('has modifier' some abnormal)) | MP:0002750 | exophthalmos | has part' some (protruding and ('characteristic of' some 'camera-type eye') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000372 | Abnormality of the auditory canal | has part' some (quality and ('characteristic of part of' some 'external acoustic meatus') and ('has modifier' some abnormal)) | MP:0006033 | abnormal external auditory canal morphology | has part' some (quality and ('characteristic of' some 'external acoustic meatus') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0008516 | Abnormality of the vertebral spinous processes | has part' some (quality and ('characteristic of part of' some 'neural spine') and ('has modifier' some abnormal)) | MP:0004601 | abnormal vertebral spinous process morphology | has part' some (quality and ('characteristic of' some 'neural spine') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000364 | Hearing abnormality | has part' some (quality and ('characteristic of part of' some 'sensory perception of sound') and ('has modifier' some abnormal)) | MP:0001963 | abnormal hearing physiology | has part' some (quality and ('characteristic of' some 'sensory perception of sound') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000925 | Abnormality of the vertebral column | has part' some (quality and ('characteristic of part of' some 'vertebral column') and ('has modifier' some abnormal)) | MP:0004703 | abnormal vertebral column morphology | has part' some (morphology and ('characteristic of part of' some 'vertebral column') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001000 | Abnormality of skin pigmentation | has part' some (quality and ('characteristic of part of' some (pigmentation and ('occurs in' some 'zone of skin'))) and ('has modifier' some abnormal)) | MP:0002095 | abnormal skin pigmentation | has part' some (quality and ('characteristic of' some (pigmentation and ('occurs in' some 'skin of body'))) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001928 | Abnormality of coagulation | has part' some (quality and ('characteristic of part of' some coagulation) and ('has modifier' some abnormal)) | MP:0002551 | abnormal blood coagulation | has part' some (quality and ('characteristic of' some 'blood coagulation') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0003336 | Abnormal enchondral ossification | has part' some (quality and ('characteristic of' some ('endochondral ossification' and ('occurs in' some 'bone element'))) and ('has modifier' some abnormal)) | MP:0008272 | abnormal endochondral bone ossification | has part' some (quality and ('characteristic of' some 'endochondral ossification') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0011849 | Abnormal bone ossification | has part' some (quality and ('characteristic of' some (ossification and ('occurs in' some 'bone element'))) and ('has modifier' some abnormal)) | MP:0008271 | abnormal bone ossification | has part' some (quality and ('characteristic of part of' some ossification) and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0001750 | Single ventricle | has part' some (undivided and ('characteristic of' some 'cardiac ventricle') and ('has modifier' some abnormal)) | MP:0010432 | common ventricle | has part' some (absent and ('characteristic of' some 'interventricular septum') and ('has modifier' some abnormal)) | disagree (to be reviewed) |
| HP:0000175 | Cleft palate | has part' some ('closure incomplete' and ('characteristic of' some 'secondary palate') and ('has modifier' some abnormal)) | MP:0000111 | cleft palate | HPO to MP | |
| HP:0011892 | Low levels of vitamin K | has part' some ('decreased amount' and ('characteristic of' some 'vitamin K') and ('has modifier' some abnormal)) | MP:0031263 | decreased vitamin K level | HPO to MP | |
| HP:0012418 | Hypoxemia | has part' some ('decreased amount' and ('characteristic of' some (dioxygen and (part_of some blood))) and ('has modifier' some abnormal)) | MP:0012549 | hypoxemia | HPO to MP | |
| HP:0000405 | Conductive hearing impairment | has part' some ('decreased rate' and ('characteristic of' some 'vibrational conductance of sound to the inner ear') and ('has modifier' some abnormal)) | MP:0006326 | conductive hearing impairment | HPO to MP | |
| HP:0000407 | Sensorineural hearing impairment | has part' some ('decreased rate' and ('characteristic of' some ('sensory perception of sound' and ('occurs in' some nerve))) and ('has modifier' some abnormal)) | MP:0006329 | sensorineural hearing impairment | HPO to MP | |
| HP:0007633 | Bilateral microphthalmos | has part' some ('decreased size' and ('characteristic of' some 'eyeball of camera-type eye') and ('has modifier' some abnormal) and ('has modifier' some bilateral)) | MP:0031290 | bilateral microphthalmia | HPO to MP | |
| HP:0000568 | Microphthalmia | has part' some ('decreased size' and ('characteristic of' some 'eyeball of camera-type eye') and ('has modifier' some abnormal)) | MP:0001297 | microphthalmia | HPO to MP | |
| HP:0000023 | Inguinal hernia | has part' some ('herniated into' and ('characteristic of' some 'abdominal wall') and (towards some 'inguinal ring') and ('has modifier' some abnormal)) | MP:0006077 | inguinal hernia | HPO to MP | |
| HP:0003281 | Increased serum ferritin | has part' some ('increased amount' and ('characteristic of' some ('ferritin complex' and (part_of some 'blood serum'))) and ('has modifier' some abnormal)) | MP:0011890 | increased circulating ferritin level | HPO to MP | |
| HP:0000509 | Conjunctivitis | has part' some ('increased amount' and ('characteristic of' some ('inflammatory response' and ('occurs in' some conjunctiva))) and ('has modifier' some abnormal)) | MP:0001311 | conjunctivitis | HPO to MP | |
| HP:0012592 | Albuminuria | has part' some ('increased amount' and ('characteristic of' some (albumin and (part_of some urine))) and ('has modifier' some abnormal)) | MP:0002871 | albuminuria | HPO to MP | |
| HP:0003118 | Increased circulating cortisol level | has part' some ('increased amount' and ('characteristic of' some (cortisol and (part_of some blood))) and ('has modifier' some abnormal)) | MP:0014161 | increased circulating cortisol level | HPO to MP | |
| HP:0000107 | Renal cyst | has part' some ('increased amount' and ('characteristic of' some (cyst and (part_of some kidney))) and ('has modifier' some abnormal)) | MP:0003675 | kidney cysts | HPO to MP | |
| HP:0002446 | Astrocytosis | has part' some ('increased rate' and ('characteristic of part of' some ('cell growth' and ('occurs in' some astrocyte))) and ('has modifier' some abnormal)) | MP:0003354 | astrocytosis | HPO to MP | |
| HP:0002171 | Gliosis | has part' some ('increased rate' and ('characteristic of' some 'glial cell growth') and ('has modifier' some abnormal)) | MP:0002183 | gliosis | HPO to MP | |
| HP:0002119 | Ventriculomegaly | has part' some ('increased size' and ('characteristic of' some 'brain ventricle') and ('has modifier' some abnormal)) | MP:0011380 | enlarged brain ventricles | HPO to MP | |
| HP:0000105 | Enlarged kidney | has part' some ('increased size' and ('characteristic of' some kidney) and ('has modifier' some abnormal)) | MP:0003068 | enlarged kidney | HPO to MP | |
| HP:0002240 | Hepatomegaly | has part' some ('increased size' and ('characteristic of' some liver) and ('has modifier' some abnormal)) | MP:0000599 | enlarged liver | HPO to MP | |
| HP:0000039 | Epispadias | has part' some ('mislocalised dorsally' and ('characteristic of' some 'urethral meatus') and ('has modifier' some abnormal)) | MP:0003598 | epispadia | HPO to MP | |
| HP:0000648 | Optic atrophy | has part' some (atrophied and ('characteristic of' some 'cranial nerve II') and ('has modifier' some abnormal)) | MP:0001059 | optic nerve atrophy | HPO to MP | |
| HP:0410170 | Hippocampal atrophy | has part' some (atrophied and ('characteristic of' some 'hippocampal formation') and ('has modifier' some abnormal)) | MP:0030003 | hippocampus atrophy | HPO to MP | |
| HP:0001272 | Cerebellar atrophy | has part' some (atrophied and ('characteristic of' some cerebellum) and ('has modifier' some abnormal)) | MP:0014185 | cerebellum atrophy | HPO to MP | |
| HP:0008066 | Abnormal blistering of the skin | has part' some (blistered and ('characteristic of part of' some 'skin of body') and ('has modifier' some abnormal)) | MP:0001208 | blistering | HPO to MP | |
| HP:0000767 | Pectus excavatum | has part' some (concave and ('characteristic of' some sternum) and ('has modifier' some abnormal)) | MP:0012514 | pectus excavatum | HPO to MP | |
| HP:0001680 | Coarctation of aorta | has part' some (constricted and ('characteristic of' some aorta) and ('has modifier' some abnormal)) | MP:0003387 | aorta coarctation | HPO to MP | |
| HP:0012741 | Unilateral cryptorchidism | has part' some (Cryptorchidism and ('has modifier' some abnormal) and ('has modifier' some unilateral)) | MP:0031286 | unilateral cryptorchism | HPO to MP | |
| HP:0000807 | Glandular hypospadias | has part' some (displaced and ('characteristic of' some 'male urethral meatus') and (towards some 'base of glans penis') and ('has modifier' some abnormal)) | MP:0031295 | glanular hypospadia | HPO to MP | |
| HP:0003244 | Penile hypospadias | has part' some (displaced and ('characteristic of' some 'male urethral meatus') and (towards some 'ventral surface of penis') and ('has modifier' some abnormal)) | MP:0031294 | penile hypospadia | HPO to MP | |
| HP:0002202 | Pleural effusion | has part' some (edematous and ('characteristic of' some 'pleural cavity') and ('has modifier' some abnormal)) | MP:0010334 | pleural effusion | HPO to MP | |
| HP:0000988 | Skin rash | has part' some (erythematous and ('characteristic of part of' some 'skin of body') and ('has modifier' some abnormal)) | MP:0031103 | skin rash | HPO to MP | |
| HP:0002836 | Bladder exstrophy | has part' some (everted and ('characteristic of' some 'urinary bladder') and ('has modifier' some abnormal)) | MP:0013282 | urinary bladder exstrophy | HPO to MP | |
| HP:0012332 | Abnormal autonomic nervous system physiology | has part' some (functionality and ('characteristic of' some 'autonomic nervous system') and ('has modifier' some abnormal)) | MP:0006276 | abnormal autonomic nervous system physiology | HPO to MP | |
| HP:0012638 | Abnormal nervous system physiology | has part' some (functionality and ('characteristic of' some 'nervous system') and ('has modifier' some abnormal)) | MP:0003633 | abnormal nervous system physiology | HPO to MP | |
| HP:0012211 | Abnormal renal physiology | has part' some (functionality and ('characteristic of' some kidney) and ('has modifier' some abnormal)) | MP:0002136 | abnormal kidney physiology | HPO to MP | |
| HP:0001539 | Omphalocele | has part' some (herniated and ('characteristic of' some 'abdominal viscera') and ('has modifier' some abnormal)) | MP:0003052 | omphalocele | HPO to MP | |
| HP:0002716 | Lymphadenopathy | has part' some (hyperplastic and ('characteristic of' some 'lymph node') and ('has modifier' some abnormal)) | MP:0000702 | enlarged lymph nodes | HPO to MP | |
| HP:0000028 | Cryptorchidism | has part' some (mislocalised and ('characteristic of' some testis) and ('has modifier' some abnormal)) | MP:0002286 | cryptorchism | HPO to MP | |
| HP:0001646 | Abnormal aortic valve morphology | has part' some (morphology and ('characteristic of part of' some 'aortic valve') and ('has modifier' some abnormal)) | MP:0002747 | abnormal aortic valve morphology | HPO to MP | |
| HP:0011844 | Abnormal appendicular skeleton morphology | has part' some (morphology and ('characteristic of part of' some 'appendicular skeleton') and ('has modifier' some abnormal)) | MP:0009250 | abnormal appendicular skeleton morphology | HPO to MP | |
| HP:0003312 | Abnormal form of the vertebral bodies | has part' some (morphology and ('characteristic of part of' some 'bony vertebral centrum') and ('has modifier' some abnormal)) | MP:0000141 | abnormal vertebral body morphology | HPO to MP | |
| HP:0002500 | Abnormal cerebral white matter morphology | has part' some (morphology and ('characteristic of part of' some 'cerebral hemisphere white matter') and ('has modifier' some abnormal)) | MP:0008026 | abnormal brain white matter morphology | HPO to MP | |
| HP:0000889 | Abnormal clavicle morphology | has part' some (morphology and ('characteristic of part of' some 'clavicle bone') and ('has modifier' some abnormal)) | MP:0005298 | abnormal clavicle morphology | HPO to MP | |
| HP:0005344 | Abnormal carotid artery morphology | has part' some (morphology and ('characteristic of part of' some 'common carotid artery plus branches') and ('has modifier' some abnormal)) | MP:0004181 | abnormal carotid artery morphology | HPO to MP | |
| HP:0006704 | Abnormal coronary artery morphology | has part' some (morphology and ('characteristic of part of' some 'coronary artery') and ('has modifier' some abnormal)) | MP:0004111 | abnormal coronary artery morphology | HPO to MP | |
| HP:0011821 | Abnormality of facial skeleton | has part' some (morphology and ('characteristic of part of' some 'facial skeleton') and ('has modifier' some abnormal)) | MP:0005274 | abnormal viscerocranium morphology | HPO to MP | |
| HP:0001633 | Abnormal mitral valve morphology | has part' some (morphology and ('characteristic of part of' some 'mitral valve') and ('has modifier' some abnormal)) | MP:0000286 | abnormal mitral valve morphology | HPO to MP | |
| HP:0030966 | Abnormal pulmonary artery morphology | has part' some (morphology and ('characteristic of part of' some 'pulmonary artery') and ('has modifier' some abnormal)) | MP:0000484 | abnormal pulmonary artery morphology | HPO to MP | |
| HP:0001641 | Abnormal pulmonary valve morphology | has part' some (morphology and ('characteristic of part of' some 'pulmonary valve') and ('has modifier' some abnormal)) | MP:0002748 | abnormal pulmonary valve morphology | HPO to MP | |
| HP:0000174 | Abnormal palate morphology | has part' some (morphology and ('characteristic of part of' some 'secondary palate') and ('has modifier' some abnormal)) | MP:0003755 | abnormal palate morphology | HPO to MP | |
| HP:0001702 | Abnormal tricuspid valve morphology | has part' some (morphology and ('characteristic of part of' some 'tricuspid valve') and ('has modifier' some abnormal)) | MP:0002624 | abnormal tricuspid valve morphology | HPO to MP | |
| HP:0001679 | Abnormal aortic morphology | has part' some (morphology and ('characteristic of part of' some aorta) and ('has modifier' some abnormal)) | MP:0000272 | abnormal aorta morphology | HPO to MP | |
| HP:0012443 | Abnormality of brain morphology | has part' some (morphology and ('characteristic of part of' some brain) and ('has modifier' some abnormal)) | MP:0002152 | abnormal brain morphology | HPO to MP | |
| HP:0025426 | Abnormal bronchus morphology | has part' some (morphology and ('characteristic of part of' some bronchus) and ('has modifier' some abnormal)) | MP:0002264 | abnormal bronchus morphology | HPO to MP | |
| HP:0031703 | Abnormal ear morphology | has part' some (morphology and ('characteristic of part of' some ear) and ('has modifier' some abnormal)) | MP:0002102 | abnormal ear morphology | HPO to MP | |
| HP:0001627 | Abnormal heart morphology | has part' some (morphology and ('characteristic of part of' some heart) and ('has modifier' some abnormal)) | MP:0000266 | abnormal heart morphology | HPO to MP | |
| HP:0000929 | Abnormal skull morphology | has part' some (morphology and ('characteristic of part of' some skull) and ('has modifier' some abnormal)) | MP:0000438 | abnormal cranium morphology | HPO to MP | |
| HP:0000766 | Abnormal sternum morphology | has part' some (morphology and ('characteristic of part of' some sternum) and ('has modifier' some abnormal)) | MP:0000157 | abnormal sternum morphology | HPO to MP | |
| HP:0003468 | Abnormal vertebral morphology | has part' some (morphology and ('characteristic of part of' some vertebra) and ('has modifier' some abnormal)) | MP:0000137 | abnormal vertebrae morphology | HPO to MP | |
| HP:0012303 | Abnormal aortic arch morphology | has part' some (morphology and ('characteristic of' some 'arch of aorta') and ('has modifier' some abnormal)) | MP:0004113 | abnormal aortic arch morphology | HPO to MP | |
| HP:0011035 | Abnormal renal cortex morphology | has part' some (morphology and ('characteristic of' some 'cortex of kidney') and ('has modifier' some abnormal)) | MP:0000521 | abnormal kidney cortex morphology | HPO to MP | |
| HP:0005107 | Abnormal sacrum morphology | has part' some (morphology and ('characteristic of' some 'fused sacrum') and ('has modifier' some abnormal)) | MP:0010113 | abnormal sacrum morphology | HPO to MP | |
| HP:0001711 | Abnormal left ventricle morphology | has part' some (morphology and ('characteristic of' some 'heart left ventricle') and ('has modifier' some abnormal)) | MP:0003921 | abnormal heart left ventricle morphology | HPO to MP | |
| HP:0001707 | Abnormal right ventricle morphology | has part' some (morphology and ('characteristic of' some 'heart right ventricle') and ('has modifier' some abnormal)) | MP:0003920 | abnormal heart right ventricle morphology | HPO to MP | |
| HP:0011994 | Abnormal atrial septum morphology | has part' some (morphology and ('characteristic of' some 'interatrial septum') and ('has modifier' some abnormal)) | MP:0000282 | abnormal interatrial septum morphology | HPO to MP | |
| HP:0011390 | Morphological abnormality of the inner ear | has part' some (morphology and ('characteristic of' some 'internal ear') and ('has modifier' some abnormal)) | MP:0000026 | abnormal inner ear morphology | HPO to MP | |
| HP:0010438 | Abnormal ventricular septum morphology | has part' some (morphology and ('characteristic of' some 'interventricular septum') and ('has modifier' some abnormal)) | MP:0000281 | abnormal interventricular septum morphology | HPO to MP | |
| HP:0025579 | Abnormal left atrium morphology | has part' some (morphology and ('characteristic of' some 'left cardiac atrium') and ('has modifier' some abnormal)) | MP:0003923 | abnormal heart left atrium morphology | HPO to MP | |
| HP:0001832 | Abnormal metatarsal morphology | has part' some (morphology and ('characteristic of' some 'metatarsal bone') and ('has modifier' some abnormal)) | MP:0003072 | abnormal metatarsal bone morphology | HPO to MP | |
| HP:0009121 | Abnormal axial skeleton morphology | has part' some (morphology and ('characteristic of' some 'postcranial axial skeleton') and ('has modifier' some abnormal)) | MP:0002114 | abnormal axial skeleton morphology | HPO to MP | |
| HP:0030968 | Abnormal pulmonary vein morphology | has part' some (morphology and ('characteristic of' some 'pulmonary vein') and ('has modifier' some abnormal)) | MP:0002726 | abnormal pulmonary vein morphology | HPO to MP | |
| HP:0025580 | Abnormal right atrium morphology | has part' some (morphology and ('characteristic of' some 'right cardiac atrium') and ('has modifier' some abnormal)) | MP:0003922 | abnormal heart right atrium morphology | HPO to MP | |
| HP:0100671 | Abnormal trabecular bone morphology | has part' some (morphology and ('characteristic of' some 'trabecular network of bone') and ('has modifier' some abnormal)) | MP:0000130 | abnormal trabecular bone morphology | HPO to MP | |
| HP:0410042 | Abnormal liver morphology | has part' some (morphology and ('characteristic of' some liver) and ('has modifier' some abnormal)) | MP:0000598 | abnormal liver morphology | HPO to MP | |
| HP:0002624 | Abnormal venous morphology | has part' some (morphology and ('characteristic of' some vein) and ('has modifier' some abnormal)) | MP:0002725 | abnormal vein morphology | HPO to MP | |
| HP:0001191 | Abnormal carpal morphology | has part' some (quality and ('characteristic of part of' some 'carpal bone') and ('has modifier' some abnormal)) | MP:0000554 | abnormal carpal bone morphology | HPO to MP | |
| HP:0000587 | Abnormality of the optic nerve | has part' some (quality and ('characteristic of part of' some 'cranial nerve II') and ('has modifier' some abnormal)) | MP:0001330 | abnormal optic nerve morphology | HPO to MP | |
| HP:0000359 | Abnormality of the inner ear | has part' some (quality and ('characteristic of part of' some 'internal ear') and ('has modifier' some abnormal)) | MP:0000026 | abnormal inner ear morphology | HPO to MP | |
| HP:0005108 | Abnormal intervertebral disk morphology | has part' some (quality and ('characteristic of part of' some 'intervertebral disk') and ('has modifier' some abnormal)) | MP:0004173 | abnormal intervertebral disk morphology | HPO to MP | |
| HP:0001939 | Abnormality of metabolism/homeostasis | has part' some (quality and ('characteristic of part of' some 'metabolic process') and ('has modifier' some abnormal)) | MP:0005376 | homeostasis/metabolism phenotype | HPO to MP | |
| HP:0006707 | Abnormality of the hepatic vasculature | has part' some (quality and ('characteristic of part of' some 'vasculature of liver') and ('has modifier' some abnormal)) | MP:0009820 | abnormal liver vasculature morphology | HPO to MP | |
| HP:0000775 | Abnormality of the diaphragm | has part' some (quality and ('characteristic of part of' some diaphragm) and ('has modifier' some abnormal)) | MP:0002279 | abnormal diaphragm morphology | HPO to MP | |
| HP:0011297 | Abnormal digit morphology | has part' some (quality and ('characteristic of part of' some digit) and ('has modifier' some abnormal)) | MP:0002110 | abnormal digit morphology | HPO to MP | |
| HP:0010478 | Abnormality of the urachus | has part' some (quality and ('characteristic of part of' some urachus) and ('has modifier' some abnormal)) | MP:0003616 | abnormal urachus morphology | HPO to MP | |
| HP:0000682 | Abnormality of dental enamel | has part' some (quality and ('characteristic of' some (enamel and (part_of some 'calcareous tooth'))) and ('has modifier' some abnormal)) | MP:0002576 | abnormal enamel morphology | HPO to MP | |
| HP:0002751 | Kyphoscoliosis | has part' some (quality and ('has part' some Scoliosis) and ('has part' some Kyphosis) and ('has modifier' some abnormal)) | MP:0000069 | kyphoscoliosis | HPO to MP | |
| HP:0011900 | Hypofibrinogenemia | MP:0012330 | decreased circulating fibrinogen level | has_part some ('decreased amount' and ('characteristic of' some ('fibrinogen complex' and ('part of' some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0031851 | Reduced hematocrit | MP:0000208 | decreased hematocrit | has_part some ('decreased amount' and ('characteristic of' some (erythrocyte and (part_of some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0020062 | Decreased hemoglobin concentration | MP:0002874 | decreased hemoglobin content | has_part some ('decreased amount' and ('characteristic of' some (hemoglobin and (part_of some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0020060 | Decreased red blood cell count | MP:0002875 | decreased erythrocyte cell number | has_part some ('decreased amount' and ('characteristic of' some erythrocyte) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0002015 | Dysphagia | MP:0003158 | dysphagia | has_part some ('decreased rate' and ('characteristic of' some swallowing) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0025406 | Asthenia | MP:0000746 | weakness | has_part some ('decreased strength' and ('characteristic of part of' some 'multicellular organism') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0030319 | Weakness of facial musculature | MP:0031314 | facial muscle weakness | has_part some ('decreased strength' and ('characteristic of' some 'facial muscle') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0011106 | Hypovolemia | MP:0010128 | hypovolemia | has_part some ('decreased volume' and ('characteristic of' some blood) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0010296 | Ankyloglossia | MP:0013264 | tongue ankylosis | has_part some ('fused with' and ('characteristic of' some tongue) and (towards some 'mouth floor') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0025407 | Rectourethral fistula | MP:0011786 | rectourethral fistula | has_part some ('has extra parts of type' and ('characteristic of' some urethra) and ('characteristic of' some rectum) and (towards some fistula) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0012384 | Rhinitis | MP:0001867 | rhinitis | has_part some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some 'nasal cavity mucosa'))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0002383 | Encephalitis | MP:0001847 | brain inflammation | has_part some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some brain))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0011950 | Bronchiolitis | MP:0031054 | bronchiolitis | has_part some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some bronchiole))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0012387 | Bronchitis | MP:0031055 | bronchitis | has_part some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some bronchus))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0100633 | Esophagitis | MP:0003278 | esophageal inflammation | has_part some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some esophagus))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0002102 | Pleuritis | MP:0031053 | pleuritis | has_part some ('increased amount' and ('characteristic of part of' some ('inflammatory response' and ('occurs in' some pleura))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0031964 | Elevated circulating alanine aminotransferase concentration | MP:0002941 | increased circulating alanine transaminase level | has_part some ('increased amount' and ('characteristic of' some 'alanine aminotransferase 1') and ('characteristic of part of' some blood) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0031956 | Elevated circulating aspartate aminotransferase concentration | MP:0005343 | increased circulating aspartate transaminase level | has_part some ('increased amount' and ('characteristic of' some ('aspartate aminotransferase, cytoplasmic' and (part_of some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0011227 | Elevated circulating C-reactive protein concentration | MP:0031059 | increased circulating C-reactive protein level | has_part some ('increased amount' and ('characteristic of' some ('C-reactive protein' and ('part of' some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0011899 | Hyperfibrinogenemia | MP:0012331 | increased circulating fibrinogen level | has_part some ('increased amount' and ('characteristic of' some ('fibrinogen complex' and ('part of' some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0002138 | Subarachnoid hemorrhage | MP:0031109 | subarachnoid hemorrhage | has_part some ('increased amount' and ('characteristic of' some ('hemorrhage and non-specified extravasation' and ('part of' some 'subarachnoid space'))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0012541 | Cephalohematoma | MP:0001915 | intracranial hemorrhage | has_part some ('increased amount' and ('characteristic of' some ('hemorrhage and non-specified extravasation' and (part_of some cranium))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0030356 | Increased serum interferon-gamma level | MP:0008577 | increased circulating interferon-gamma level | has_part some ('increased amount' and ('characteristic of' some ('interferon gamma' and (part_of some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0033199 | Increased circulating interleukin 10 | MP:0008593 | increased circulating interleukin-10 level | has_part some ('increased amount' and ('characteristic of' some (interleukin-10 and (part_of some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0030783 | Increased serum interleukin-6 | MP:0008596 | increased circulating interleukin-6 level | has_part some ('increased amount' and ('characteristic of' some (interleukin-6 and (part_of some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0033178 | Increased circulating interleukin 8 | MP:0011714 | increased circulating interleukin-8 level | has_part some ('increased amount' and ('characteristic of' some (interleukin-8 and (part_of some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0033438 | Elevated circulating myoglobin concentration | MP:0031108 | increased circulating myoglobin level | has_part some ('increased amount' and ('characteristic of' some (myoglobin and ('part of' some blood))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0001397 | Hepatic steatosis | MP:0002628 | hepatic steatosis | has_part some ('increased amount' and ('characteristic of' some (steatosis and (part_of some liver))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0011897 | Neutrophilia | MP:0000219 | increased neutrophil cell number | has_part some ('increased amount' and ('characteristic of' some neutrophil) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0001649 | Tachycardia | MP:0002626 | increased heart rate | has_part some ('increased frequency' and ('characteristic of part of' some 'heart contraction') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0009926 | Epiphora | MP:0001349 | epiphora | has_part some ('increased rate' and ('characteristic of' some 'tear secretion') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0030875 | Abnormality of pulmonary circulation | MP:0002295 | abnormal pulmonary circulation | has_part some ('process quality' and ('characteristic of' some ('blood circulation' and ('occurs in' some 'lung blood vessel'))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0011611 | Interrupted aortic arch | MP:0004157 | interrupted aortic arch | has_part some ('structurally discontinuous' and ('characteristic of' some 'arch of aorta') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0000016 | Urinary retention | MP:0003622 | ischuria | has_part some (arrested and ('characteristic of' some micturition) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0005110 | Atrial fibrillation | MP:0008543 | atrial fibrillation | has_part some (asynchronous and ('characteristic of' some ('cardiac muscle contraction' and ('occurs in' some 'cardiac atrium'))) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0100750 | Atelectasis | MP:0001177 | atelectasis | has_part some (collapsed and ('characteristic of part of' some lung) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0005133 | Right ventricular dilatation | MP:0002754 | dilated heart right ventricle | has_part some (dilated and ('characteristic of' some 'heart right ventricle') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0000126 | Hydronephrosis | MP:0000519 | hydronephrosis | has_part some (dilated and ('characteristic of' some 'renal pelvis') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0012375 | Chemosis | MP:0031097 | conjunctival chemosis | has_part some (edematous and ('characteristic of' some conjunctiva) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0012020 | Right aortic arch | MP:0004158 | right aortic arch | has_part some (inverted and ('characteristic of' some 'arch of aorta') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0032929 | Abnormal chondrocyte morphology | MP:0000166 | abnormal chondrocyte morphology | has_part some (morphology and ('characteristic of' some chondrocyte) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0031411 | Abnormal chromosome morphology | MP:0003702 | abnormal chromosome morphology | has_part some (morphology and ('characteristic of' some chromosome) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0002878 | Respiratory failure | MP:0001953 | respiratory failure | has_part some (non-functional and ('characteristic of' some 'respiratory system') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0000074 | Ureteropelvic junction obstruction | MP:0011491 | ureteropelvic junction obstruction | has_part some (obstructed and ('characteristic of' some 'ureteropelvic junction') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0012790 | Abnormal intramembranous ossification | MP:0008273 | abnormal intramembranous bone ossification | has_part some (quality and ('characteristic of' some 'intramembranous ossification') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0040106 | Morphological abnormality of the lateral semicircular canal | MP:0000037 | abnormal lateral semicircular canal morphology | has_part some (quality and ('characteristic of' some 'lateral semicircular canal') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0001288 | Gait disturbance | MP:0001406 | abnormal gait | has_part some (quality and ('characteristic of' some gait) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0001096 | Keratoconjunctivitis | MP:0006194 | keratoconjunctivitis | has_part some (quality and (has_part some 'increased incidence of corneal inflammation') and (has_part some conjunctivitis) and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0011590 | Double aortic arch | MP:0004159 | double aortic arch | has_part some (split and ('characteristic of' some 'arch of aorta') and ('has modifier' some abnormal)) | MP to HPO | |
| HP:0000041 | Chordee | MP:0003555 | chordee | lack EQ | ||
| HP:0000070 | Ureterocele | MP:0011767 | ureterocele | lack EQ | ||
| HP:0000125 | Pelvic kidney | MP:0011361 | pelvic kidney | lack EQ | ||
| HP:0000224 | Hypogeusia | MP:0031091 | hypogeusia | lack EQ | ||
| HP:0000360 | Tinnitus | MP:0003741 | tinnitus | lack EQ | ||
| HP:0000384 | Preauricular skin tag | MP:0031305 | preauricular skin tag | lack EQ | ||
| HP:0000473 | Torticollis | MP:0030126 | torticollis | lack EQ | ||
| HP:0000519 | Developmental cataract | MP:0031345 | developmental cataract | lack EQ | ||
| HP:0000565 | Esotropia | MP:0005256 | esotropia | lack EQ | ||
| HP:0000577 | Exotropia | MP:0005255 | exotropia | lack EQ | ||
| HP:0000622 | Blurred vision | MP:0006149 | decreased visual acuity | lack EQ | ||
| HP:0000651 | Diplopia | MP:0006150 | double vision | lack EQ | ||
| HP:0000787 | Nephrolithiasis | MP:0002708 | nephrolithiasis | lack EQ | ||
| HP:0000808 | Penoscrotal hypospadias | MP:0031296 | penoscrotal hypospadia | lack EQ | ||
| HP:0000967 | Petechiae | MP:0008816 | petechiae | lack EQ | ||
| HP:0000979 | Purpura | MP:0011515 | purpura | lack EQ | ||
| HP:0001250 | Seizure | MP:0002064 | seizures | lack EQ | ||
| HP:0001254 | Lethargy | MP:0005202 | lethargy | lack EQ | ||
| HP:0001269 | Hemiparesis | MP:0031201 | hemiparesis | lack EQ | ||
| HP:0001279 | Syncope | MP:0031302 | syncope | lack EQ | ||
| HP:0001298 | Encephalopathy | MP:0013806 | encephalopathy | lack EQ | ||
| HP:0001336 | Myoclonus | MP:0000243 | myoclonus | lack EQ | ||
| HP:0001388 | Joint laxity | MP:0030797 | joint laxity | lack EQ | ||
| HP:0001414 | Microvesicular hepatic steatosis | MP:0031116 | microvesicular hepatic steatosis | lack EQ | ||
| HP:0001684 | Secundum atrial septal defect | MP:0010405 | ostium secundum atrial septal defect | lack EQ | ||
| HP:0001696 | Situs inversus totalis | MP:0011252 | situs inversus totalis | lack EQ | ||
| HP:0001698 | Pericardial effusion | MP:0005312 | pericardial effusion | lack EQ | ||
| HP:0001719 | Double outlet right ventricle | MP:0000284 | double outlet right ventricle | lack EQ | ||
| HP:0001741 | Phimosis | MP:0003554 | phimosis | lack EQ | ||
| HP:0001942 | Metabolic acidosis | MP:0012551 | metabolic acidosis | lack EQ | ||
| HP:0001977 | Abnormal thrombosis | MP:0005048 | abnormal thrombosis | lack EQ | ||
| HP:0002013 | Vomiting | MP:0003260 | vomiting | lack EQ | ||
| HP:0002018 | Nausea | MP:0003259 | nausea | lack EQ | ||
| HP:0002020 | Gastroesophageal reflux | MP:0003286 | gastroesophageal reflux | lack EQ | ||
| HP:0002094 | Dyspnea | MP:0001954 | respiratory distress | lack EQ | ||
| HP:0002098 | Respiratory distress | MP:0001954 | respiratory distress | lack EQ | ||
| HP:0002105 | Hemoptysis | MP:0031100 | hemoptysis | lack EQ | ||
| HP:0002107 | Pneumothorax | MP:0010822 | pneumothorax | lack EQ | ||
| HP:0002110 | Bronchiectasis | MP:0011012 | bronchiectasis | lack EQ | ||
| HP:0002185 | Neurofibrillary tangles | MP:0003214 | neurofibrillary tangles | lack EQ | ||
| HP:0002204 | Pulmonary embolism | MP:0031080 | pulmonary embolism | lack EQ | ||
| HP:0002248 | Hematemesis | MP:0003261 | hematemesis | lack EQ | ||
| HP:0002301 | Hemiplegia | MP:0031202 | hemiplegia | lack EQ | ||
| HP:0002408 | Cerebral arteriovenous malformation | MP:0010530 | cerebral arteriovenous malformation | lack EQ | ||
| HP:0002414 | Spina bifida | MP:0003054 | spina bifida | lack EQ | ||
| HP:0002435 | Meningocele | MP:0012259 | meningocele | lack EQ | ||
| HP:0002475 | Myelomeningocele | MP:0009929 | meningomyelocele | lack EQ | ||
| HP:0002637 | Cerebral ischemia | MP:0006080 | brain ischemia | lack EQ | ||
| HP:0002779 | Tracheomalacia | MP:0013753 | tracheomalacia | lack EQ | ||
| HP:0002786 | Tracheobronchomalacia | MP:0031308 | tracheobronchomalacia | lack EQ | ||
| HP:0002937 | Hemivertebrae | MP:0008832 | hemivertebra | lack EQ | ||
| HP:0003116 | Abnormal echocardiogram | MP:0011925 | abnormal heart echocardiography feature | lack EQ | ||
| HP:0003201 | Rhabdomyolysis | MP:0031112 | rhabdomyolysis | lack EQ | ||
| HP:0003298 | Spina bifida occulta | MP:0005297 | spina bifida occulta | lack EQ | ||
| HP:0003546 | Exercise intolerance | MP:0012106 | impaired exercise endurance | lack EQ | ||
| HP:0003565 | Elevated erythrocyte sedimentation rate | MP:0031063 | increased erythrocyte sedimentation rate | lack EQ | ||
| HP:0003645 | Prolonged partial thromboplastin time | MP:0012359 | increased partial thromboplastin time | lack EQ | ||
| HP:0005160 | Total anomalous pulmonary venous return | MP:0010441 | total anomalous pulmonary venous connection | lack EQ | ||
| HP:0005972 | Respiratory acidosis | MP:0012550 | respiratory acidosis | lack EQ | ||
| HP:0006515 | Interstitial pneumonitis | MP:0001862 | interstitial pneumonia | lack EQ | ||
| HP:0006517 | Alveolar proteinosis | MP:0010998 | pulmonary alveolar proteinosis | lack EQ | ||
| HP:0008081 | Pes valgus | MP:0031291 | pes valgus | lack EQ | ||
| HP:0008151 | Prolonged prothrombin time | MP:0012356 | increased prothrombin time | lack EQ | ||
| HP:0010445 | Primum atrial septal defect | MP:0010404 | ostium primum atrial septal defect | lack EQ | ||
| HP:0010735 | Polyostotic fibrous dysplasia | MP:0031350 | polyostotic fibrous dysplasia | lack EQ | ||
| HP:0010773 | Partial anomalous pulmonary venous return | MP:0010442 | partial anomalous pulmonary venous connection | lack EQ | ||
| HP:0010775 | Vascular ring | MP:0010466 | vascular ring | lack EQ | ||
| HP:0011480 | Unilateral microphthalmos | MP:0031289 | unilateral microphthalmia | lack EQ | ||
| HP:0011546 | Abnormal atrioventricular connection | MP:0010435 | abnormal heart atrium and ventricle connection | lack EQ | ||
| HP:0011620 | Abnormality of abdominal situs | MP:0031284 | abdominal situs abnormality | lack EQ | ||
| HP:0011623 | Muscular ventricular septal defect | MP:0010420 | muscular ventricular septal defect | lack EQ | ||
| HP:0011970 | Cerebral amyloid angiopathy | MP:0004254 | cerebral amyloid angiopathy | lack EQ | ||
| HP:0012156 | Hemophagocytosis | MP:0031070 | hemophagocytosis | lack EQ | ||
| HP:0012378 | Fatigue | MP:0002899 | fatigue | lack EQ | ||
| HP:0012735 | Cough | MP:0031088 | coughing | lack EQ | ||
| HP:0025095 | Sneeze | MP:0031089 | sneezing | lack EQ | ||
| HP:0025337 | Red eye | MP:0031347 | red eye | lack EQ | ||
| HP:0025435 | Increased circulating lactate dehydrogenase concentration | MP:0011971 | increased circulating lactate dehydrogenase level | lack EQ | ||
| HP:0030828 | Wheezing | MP:0031086 | wheezing | lack EQ | ||
| HP:0030829 | Abnormal breath sound | MP:0001950 | abnormal respiratory sounds | lack EQ | ||
| HP:0030830 | Crackles | MP:0031104 | crackles | lack EQ | ||
| HP:0030831 | Rhonchi | MP:0031105 | ronchi | lack EQ | ||
| HP:0030853 | Heterotaxy | MP:0004133 | heterotaxia | lack EQ | ||
| HP:0030953 | Conjunctival hyperemia | MP:0031096 | conjunctival hyperemia | lack EQ | ||
| HP:0031249 | Parageusia | MP:0031092 | dysgeusia | lack EQ | ||
| HP:0031266 | Podocyte foot process effacement | MP:0008140 | podocyte foot process effacement | lack EQ | ||
| HP:0031417 | Rhinorrhea | MP:0031102 | rhinorrhea | lack EQ | ||
| HP:0031965 | Increased RBC distribution width | MP:0010067 | increased red blood cell distribution width | lack EQ | ||
| HP:0032044 | Decreased vigilance | MP:0020224 | decreased alertness | lack EQ | ||
| HP:0032177 | Parenchymal consolidation | MP:0031113 | pulmonary parenchymal consolidation | lack EQ | ||
| HP:0032198 | Decreased prothrombin time | MP:0012355 | decreased prothrombin time | lack EQ | ||
| HP:0032308 | Increased circulating procalcitonin level | MP:0031065 | increased circulating procalcitonin level | lack EQ | ||
| HP:0033006 | Diffuse alveolar damage | MP:0031237 | diffuse alveolar damage | lack EQ | ||
| HP:0033041 | Cytokine storm | MP:0031066 | cytokine storm | lack EQ | ||
| HP:0033106 | Elevated circulating D-dimer concentration | MP:0031083 | increased circulating D-dimer level | lack EQ | ||
| HP:0033332 | Elevated circulating amyloid A | MP:0031234 | increased circulating serum amyloid protein level | lack EQ | ||
| HP:0033363 | Hyaline membranes | MP:0011018 | pulmonary hyaline membrane formation | lack EQ | ||
| HP:0033655 | Pulmonary cavity | MP:0031119 | pulmonary cavitation | lack EQ | ||
| HP:0040246 | Reduced antithrombin antigen | MP:0012325 | decreased circulating antithrombin level | lack EQ | ||
| HP:0041051 | Ageusia | MP:0031090 | ageusia | lack EQ | ||
| HP:0100309 | Subdural hemorrhage | MP:0031117 | subdural hemorrhage | lack EQ | ||
| HP:0100315 | Lewy bodies | MP:0014065 | Lewy bodies | lack EQ | ||
| HP:0100520 | Oliguria | MP:0003620 | oliguria | lack EQ | ||
| HP:0100588 | Paraphimosis | MP:0010033 | paraphimosis | lack EQ | ||
| HP:0100724 | Hypercoagulability | MP:0031214 | hypercoagulability | lack EQ | ||
| HP:0100758 | Gangrene | MP:0031126 | gangrene | lack EQ | ||
| HP:0100777 | Exostoses | MP:0009877 | exostosis | lack EQ | ||
| HP:0100806 | Sepsis | MP:0005044 | sepsis | lack EQ | ||
| HP:0410173 | Increased troponin I level in blood | MP:0031079 | increased circulating troponin I level | lack EQ | ||
| HP:0410174 | Increased troponin T level in blood | MP:0031078 | increased circulating troponin T level | lack EQ |
matentzn commented
nice thanks for making this issue! Will you open PRs on HP and MP repos?