Pinned Repositories
ai-notebooks
Some ipython notebooks implementing AI algorithms
AllenSDK
code for reading and processing Allen Institute for Brain Science data
AstraStack
Astrophotography Stacking Application
audio
Data manipulation and transformation for audio signal processing, powered by PyTorch
auto_avsr
Auto-AVSR: Lip-Reading Sentences Project
neuron_reduce
NEURON_tutorial
Tutorial for understanding how to use NEURON simulation environment
sbx2imagej
sbx2imagej, is a wrapper between sbxreader and pyimagej, sbxreader takes care of loading sbx files and pyimagej takes care of showing them in imagej.
Specious_Regularity
sub-threshold-statistics
sub-threshold-stats
orena1's Repositories
orena1/NEURON_tutorial
Tutorial for understanding how to use NEURON simulation environment
orena1/neuron_reduce
orena1/ai-notebooks
Some ipython notebooks implementing AI algorithms
orena1/AllenSDK
code for reading and processing Allen Institute for Brain Science data
orena1/AstraStack
Astrophotography Stacking Application
orena1/automl_common
This repository holds shared utilities that AutoML frameworks may benefit from.
orena1/bonsai-rx.github.io
A visual programming language for reactive systems
orena1/bonvision.github.io
BonVision package support page
orena1/cascade
Neuroscience analysis pipeline for my projects in the Andermann lab.
orena1/CellReg
Registration of cells across sessions.
orena1/DAN
Official implementation of DAN
orena1/examples
Example workflows for the BonVision closed-loop visual environment generator
orena1/ipympl
Matplotlib Jupyter Integration
orena1/MouseFacialExpressionAnalysis
Extracting emotions from facial expressions in mice
orena1/mpl-modest-image
Friendlier matplotlib interaction with large images
orena1/multifish
EASI-FISH analysis pipeline for spatial transcriptomics
orena1/psychopy
For running psychology and neuroscience experiments
orena1/pycorrelate
Fast and accurate cross-correlation over arbitrary time lags.
orena1/pystackreg
A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.
orena1/pytorch-saliency-maps
Visualizing image-specific class saliency map in classification ConvNets in Pytorch
orena1/randomfun
Notebooks and various random fun
orena1/ranson-rig
An interactive visual stimulation rig controllable by OSC using Bonsai and BonVision
orena1/ROCm_Documentation
ROCm Software Platform Documentation
orena1/sbxreader
Reader for Neurolabware scanbox files
orena1/SpineImagingALM
Repo for the paper: Functional clustering of dendritic activity during decision-making
orena1/statannotations
add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.
orena1/tinygrad
You like pytorch? You like micrograd? You love tinygrad! ❤️
orena1/transformers
🤗Transformers: State-of-the-art Natural Language Processing for Pytorch and TensorFlow 2.0.
orena1/tutorials
PyTorch tutorials.
orena1/Volume_Viewer