overture-stack/SONG

Issues

• Make FileType validations configurable in dynamic schemas

  #852 opened 4 months ago by joneubank
  1

• BUG - Song does not merge definitions from uploaded schemas

  #876 opened 2 months ago by pvanheus
  0

• Epic - Separate Donor/Specimen/Sample model from Analysis model

  #863 opened 3 months ago by joneubank
  1

• Perform External Validation on Analysis

  #875 opened 2 months ago by joneubank
  0

• Remove Donor/Specimen/Sample - from Analysis Entity Classes

  #864 opened 3 months ago by joneubank
  0

• Remove Donor/Specimen/Sample - from JSON schemas

  #865 opened 3 months ago by joneubank
  0

• Store External Validation Rules for Dynamic Schemas

  #872 opened 2 months ago by joneubank
  0

• Add External Validation rules to Dynamic Schema Options

  #871 opened 2 months ago by joneubank
  0

• BUG - Unauthorized Error when Creating An Analysis in SONG via Swagger UI

  #853 opened 3 months ago by Azher2Ali
  3

• Remove FileTypes enum and all references

  #862 opened 3 months ago by joneubank
  0

• Updating the documentation by removing icgc and cancer collaboratory references.

  #847 opened 4 months ago by Azher2Ali
  0

• References related to collaboratory in docker-compose

  #851 opened 4 months ago by Azher2Ali
  0

• Rename ICGC Bucket Names to score.data and score.state in Docker-Compose and Makefile

  #848 opened 4 months ago by Azher2Ali
  0

• Remove ICGC Object Storage Configuration from Codebase

  #846 opened 4 months ago by Azher2Ali
  1

• Remove ICGC trace from the codebase

  #844 opened 4 months ago by Azher2Ali
  1

• Remove ICGC25k Dockerfile and Song Server Configuration from Codebase

  #845 opened 4 months ago by Azher2Ali
  0

• Add documentation on available Auth Providers

  #842 opened 6 months ago by joneubank
  0

• Flyaway upgrade

  #840 opened 7 months ago by MitchellShiell
  0

• Update docker-compose.yml to use latest images for overture

  #837 opened a year ago by leoraba
  0

• Create a Spring profile to choose whether Ego or Keylcloak

  #833 opened a year ago by leoraba
  1

• Extract Keycloak permissions using access_token

  #829 opened a year ago by leoraba
  1

• Create new docker-compose file to include keycloak

  #834 opened a year ago by leoraba
  0

• Implement APIKey as user authentication

  #835 opened a year ago by leoraba
  0

• Keycloak integration

  #832 opened a year ago by leoraba
  0

• Keycloak integration

  #831 opened a year ago by leoraba
  1

• Add optional validations to prevent duplicate analysis submissions

  #824 opened a year ago by leoraba
  2

• Add new enum `Cell line – derived from metastatic tumour` and `Xenograft – derived from metastatic tumour` to specimen_type

  #790 opened a year ago by hknahal
  4

• Deploy Latest Song to Prod

  #825 opened a year ago by Buwujiu
  0

• Project Description, Contributions, Support and Licensing

  #808 opened a year ago by MitchellShiell
  0

• Documentation Style Guide

  #807 opened a year ago by MitchellShiell
  0

• Feature Request - change the validation rules in Song base schema to support tumour only targeted seq submissions

  #815 opened a year ago by lindaxiang
  5

• Setting up the developer environment

  #805 opened a year ago by MitchellShiell
  0

• Usage

  #806 opened a year ago by MitchellShiell
  0

• Song Documentation MVP

  #794 opened 2 years ago by MitchellShiell
  0

• Song-client and Song-server unit tests failing due to a Json parsing error

  #799 opened 2 years ago by anncatton
  1

• Cannot run docker-compose

  #798 opened 2 years ago by anncatton
  2

• Add new enum `Tumour - unknown if derived from primary or metastatic` to specimen_type

  #775 opened 2 years ago by Buwujiu
  3

• Add parameters to GET endpoint /studies/{studyId}/analysis/search/id

  #783 opened 2 years ago
  3

• Developer Setup Documentation

  #795 opened 2 years ago by MitchellShiell
  0

• Technical Details Documentation

  #796 opened 2 years ago by MitchellShiell
  0

• Song Readme-update PR

  #804 opened 2 years ago by MitchellShiell
  0

• Technologies

  #803 opened 2 years ago by MitchellShiell
  0

• Integrations

  #802 opened 2 years ago by MitchellShiell
  0

• Components

  #801 opened 2 years ago by MitchellShiell
  0

• Software Architecture

  #800 opened 2 years ago by MitchellShiell
  0

• Send kafka notification to Maestro for Update analysis endpoint

  #779 opened 2 years ago
  0

• PATCH Analysis Endpoint

  #782 opened 2 years ago by lrivera-oicr
  1

• BUG - Delete Samples Broken in QA and Prod

  #777 opened 2 years ago by Buwujiu
  2

• BUG - SONG Publish in Prod return `500` (access denied) error when api_token is Valid

  #776 opened 2 years ago by lindaxiang
  2

• Upgrade SpringBoot to 2.6.6

  #774 opened 2 years ago by Buwujiu
  0