pablopains
Biologist, botanist, brewer, researcher of vegetation in karst areas
JBRJ - Jardim Botânico do Rio de JaneiroRio de Janeiro - RJ
Pinned Repositories
catalogoUCsBR
The package is designed to convert species occurrence data from the Jabot Geral, Jabot RB, Reflora, SpeciesLink and GBIF data portals into a more understandable format for use in preparing species listings for the Plant Catalog of Units of Brazilian Conservation.
CheckNamesBrazilianFlora2020
Search for valid names and synonyms according to Brazilian Flora 2020, with the latest update of the database.
CNCFlora
Repositório com scripts R para preparação e pre-validação de dados para avaliação de risco de extinção da flora
ColombiaFlora
Scripts with data processing flow for: 1) Standardize and join data of plants of Colombia from SiB Colombia and GBIF - Global Biodiversity Information Facility. 2) Match names against POWO taxonomy and 3) Geographic cleaning.
HerbariumLabel
Generates two models of labels for herbarium exsicates (5 and 6 sheets per page). Data input according to Darwin Core Terms. Includes duplicates.
PaleoDataClim
Extract current and paleoclimate ( Mid-Holocene, Last Glacial Maximum and Last inter-glacial) data using WorldClim 1.4 - CCSM4. Variables: tn - monthly average minimum temperature (degrees C * 10) tx - monthly average maximum temperature (degrees C * 10) pr - monthly total precipitation (mm) bc - 'bioclimatic' variables
parseGBIF
parseGBIF package is designed to convert [Global Biodiversity Information Facility - GBIF](https://www.gbif.org/) plant specimen occurrence data to a more comprehensible format to be used for further analysis, e.g. spatial.
plantasAquaticasBR
Ferramentas de acesso ao repositório de dados de Plantas Aquáticas do Brasil, administrado pelo Núcleo de Especialistas em Plantas Aquáticas (NEPA) e indexado à Flora & Funga do Brasil.
pablopains's Repositories
pablopains/parseGBIF
parseGBIF package is designed to convert [Global Biodiversity Information Facility - GBIF](https://www.gbif.org/) plant specimen occurrence data to a more comprehensible format to be used for further analysis, e.g. spatial.
pablopains/CNCFlora
Repositório com scripts R para preparação e pre-validação de dados para avaliação de risco de extinção da flora
pablopains/catalogoUCsBR
The package is designed to convert species occurrence data from the Jabot Geral, Jabot RB, Reflora, SpeciesLink and GBIF data portals into a more understandable format for use in preparing species listings for the Plant Catalog of Units of Brazilian Conservation.
pablopains/CheckNamesBrazilianFlora2020
Search for valid names and synonyms according to Brazilian Flora 2020, with the latest update of the database.
pablopains/ColombiaFlora
Scripts with data processing flow for: 1) Standardize and join data of plants of Colombia from SiB Colombia and GBIF - Global Biodiversity Information Facility. 2) Match names against POWO taxonomy and 3) Geographic cleaning.
pablopains/HerbariumLabel
Generates two models of labels for herbarium exsicates (5 and 6 sheets per page). Data input according to Darwin Core Terms. Includes duplicates.
pablopains/PaleoDataClim
Extract current and paleoclimate ( Mid-Holocene, Last Glacial Maximum and Last inter-glacial) data using WorldClim 1.4 - CCSM4. Variables: tn - monthly average minimum temperature (degrees C * 10) tx - monthly average maximum temperature (degrees C * 10) pr - monthly total precipitation (mm) bc - 'bioclimatic' variables
pablopains/plantasAquaticasBR
Ferramentas de acesso ao repositório de dados de Plantas Aquáticas do Brasil, administrado pelo Núcleo de Especialistas em Plantas Aquáticas (NEPA) e indexado à Flora & Funga do Brasil.
pablopains/BrazilianLimestoneVegetation
A dataset of vascular plants of limestone outcrops in Brazil
pablopains/CheckNames_KewWorldChecklistofVascularPlants
Kew’s World Checklist of Vascular Plants (http://wcsp.science.kew.org/)
pablopains/CheckNamesBrazilianFlora2020_API
FB2020 get taxon scientificname query using API
pablopains/CheckNamesTropicos
Checks the scientific name of the plants according to tropicos.org
pablopains/cncflora_scripts_r_avaliacao
Repositório para armazenar scripts R e arquivos necessários para avaliação de risco de espécies ameaçadas da flora
pablopains/CurvaOmbrotermica
CurvaOmbrotermica
pablopains/HerbariumSpecimens
tools to search, select and standardize records of herbarium specimens
pablopains/MergeSpeciesOccurrence
Combination of occurrences of species from different repositories
pablopains/SDMs
SDMs, presence-only methods, ensemble solutions