pangenome/spodgi

Issues

• Import errors when using the docker container

  #20 opened 4 months ago by heringerp
  0

• If path names have real IRI's then the "IRI denotes a path' hack does not work.

  #17 opened 4 years ago by JervenBolleman
  2

• SPARQL endpoint over http?

  #12 opened 4 years ago by JervenBolleman
  2

• SPARQL 1.1. Service does not work

  #11 opened 4 years ago by JervenBolleman
  1

• Docker images

  #13 opened 4 years ago by JervenBolleman
  1

• Integrate ODGI as a submodule into the repository?

  #3 opened 5 years ago by subwaystation
  10

• Validate Prefixes

  #9 opened 5 years ago by subwaystation
  0

• odgi_to_rdf misleading error message when 2nd argument is missing

  #10 opened 5 years ago by subwaystation
  0

• How to query SpOdgi to get external Ensembl annotations

  #8 opened 5 years ago by JervenBolleman
  0

• Step IRI generation

  #6 opened 5 years ago by JervenBolleman
  1

• Best way to turn for_each_handle into a generator instead of an internal iterator

  #4 opened 5 years ago by JervenBolleman
  3

• Inspect filters to see if they can be translated a better execution model.

  #5 opened 5 years ago by JervenBolleman
  0

• Make this Conda, pip install etc. friendly

  #1 opened 5 years ago by JervenBolleman
  1

• Mapping an IRI based lookup to ODGI

  #2 opened 5 years ago by JervenBolleman
  1