parklab/HiNT

Issues

• Bug? IndexError: list index out of range

  #1 opened 5 years ago by areyesq89
  1

• Deprecated `.ix` Pandas method causes `hint cnv` to fail.

  #14 opened 4 years ago by jrhawley
  1

• TypeError: 'numpy.float64' object cannot be interpreted as an integer

  #26 opened 4 months ago by stutimishra7
  0

• Access denied to references files

  #25 opened 5 months ago by polyaB
  0

• ValueError: row index exceeds matrix dimensions

  #24 opened 10 months ago by walidabualafia
  1

• Always report ERROR: path to the matrixfile is not valid.

  #20 opened 3 years ago by wzhang42
  3

• How to make reference files for other species

  #23 opened a year ago by xinghua1001
  0

• Hint reference and background files not available anymore.

  #16 opened 3 years ago by mblanche
  3

• Enzyme used in Hi-C experiment

  #8 opened 5 years ago by ckj199591
  1

• tabix.TabixError: Can't open the index file.

  #22 opened 2 years ago by Yousuk-Song
  0

• Error running CNV from .hic files with hg38

  #21 opened 2 years ago by ksmetz
  0

• A bug like code injection if prefix name contains underline

  #3 opened 5 years ago by omegahh
  1

• background matrix

  #18 opened 3 years ago by distilledchild
  2

• Is background matrices necessary?

  #13 opened 4 years ago by JiaoLaboratory
  1

• KeyError: 'chrom' using your docker for 'hint tl' with cooler input

  #7 opened 5 years ago by cchlanger
  2

• Errors in installing HiNT via conda

  #19 opened 3 years ago by Kurotakid
  1

• MemoryError

  #12 opened 4 years ago by ningwei-wei
  0

• mm10 GC file empty

  #11 opened 4 years ago by igoronzy
  0

• Can HiNT be used for genomes of other species, like in plants?

  #10 opened 4 years ago by clementmo
  0

• error finding Hint module

  #9 opened 4 years ago by mtegtmey
  0

• HiNT TL with cooler output

  #5 opened 5 years ago by snowsite
  0

• Error: Unable to access jarfile None

  #4 opened 5 years ago by maojn
  1

• hint cnv -f juicer: TypeError: 'int' object is not subscriptable

  #2 opened 5 years ago by sidiropoulos
  2