pascalschamber's Stars
quantumjot/btrack
Bayesian multi-object tracking
choosehappy/HistoQC
HistoQC is an open-source quality control tool for digital pathology slides
silx-kit/silx
silx toolkit
QIB-Sheffield/mdreg
Model-driven registration for quantitative medical imaging
JanMarcelKezmann/TensorFlow-Advanced-Segmentation-Models
A Python Library for High-Level Semantic Segmentation Models based on TensorFlow and Keras with pretrained backbones.
apolanco3225/Data-Augmentation-and-Segmentation-with-GANs-for-Medical-Images
Generating randomized brain MRI images from random noise using a GAN. Additionally translating from one image domain to another with a conditional GAN (pix2pix): Segmenting brain anatomy - Generating brain MRI from the segmentation - Augmenting the translation of image modalities in a limited dataset to perform ischemic stroke segmentation.
joheras/CLoDSA
NVIDIA/DALI
A GPU-accelerated library containing highly optimized building blocks and an execution engine for data processing to accelerate deep learning training and inference applications.
ZhaoJ9014/face.evoLVe
🔥🔥High-Performance Face Recognition Library on PaddlePaddle & PyTorch🔥🔥
google-deepmind/multidim-image-augmentation
This package provides TensorFlow Ops for multidimensional volumetric image augmentation.
gvtulder/elasticdeform
Differentiable elastic deformations for N-dimensional images (Python, SciPy, NumPy, TensorFlow, PyTorch).
astral-sh/uv
An extremely fast Python package and project manager, written in Rust.
engjen/cycIF_Validation
Code and data for validation studies of cycIF multiplex imaging platform
arthur-e/unmixing
Interactive tools for spectral mixture analysis of multispectral raster data in Python
TristaZeng/ZS-DeconvNet
xing-lab-pitt/mosaic-picasso
ashapsoncoe/CREST
Connectome Reconstruction and Exploration Simple Tool
conda-forge/csbdeep-feedstock
A conda-smithy repository for csbdeep.
abzargar/cGAN-Seg
ipazc/mtcnn
MTCNN face detection implementation for TensorFlow, as a PIP package.
aleju/imgaug
Image augmentation for machine learning experiments.
RoysamLab/whole_brain_analysis
nygctech/PICASSO
Development of PICASSO plugin for napari
NICALab/PICASSO
TIO-IKIM/CellViT
CellViT: Vision Transformers for Precise Cell Segmentation and Classification
clissa/fluocells-scientific-data
Repository with code for Fluocells Neuronal Cells v2 dataset.
kulikovv/dognet
A Deep Architecture for Synapse Detection in Multiplexed Fluorescence Images
EvaMWe/Synapse-Detection
yu-lab-vt/SynQuant
A Fiji plugin that automatically quantify synapses from multi-channel fluorescence microscopy images.
CMCI/n2v_workflow
A series of files for running the n2v network over a batch of images.