Pinned Repositories
COVID_NYC_Epi_Model
frontiers_var_processing_code
This repo deposits all the simulation and processing code for He et al., 2021, Frontiers in E&E
Humidity_malaria
Malaria-highlands
malaria_interventions
Effect of structure on interventions
Pf_temporal_networks
Code for paper: https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3000336
var_curves
Code to produce curves of immunity accumulation to var genes using empirical data
VarModel
originally written by Ed, this code was modified and extended by Qixin
varmodel3
Malaria model in Julia
VBM
pascualgroup's Repositories
pascualgroup/COVID_NYC_Epi_Model
pascualgroup/Humidity_malaria
pascualgroup/Malaria-highlands
pascualgroup/frontiers_var_processing_code
This repo deposits all the simulation and processing code for He et al., 2021, Frontiers in E&E
pascualgroup/Pf_temporal_networks
Code for paper: https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3000336
pascualgroup/VarModel
originally written by Ed, this code was modified and extended by Qixin
pascualgroup/varmodel3
Malaria model in Julia
pascualgroup/VBM
pascualgroup/malaria_interventions
Effect of structure on interventions
pascualgroup/var_curves
Code to produce curves of immunity accumulation to var genes using empirical data
pascualgroup/dbla_curves
pascualgroup/JRSI_DENV1_skips_Rio
Repository for JRSI Resubmission
pascualgroup/netgroups
Finds groups in networks (e.g., food webs) using stochastic block models and Metropolis-coupled Markov-chain Monte Carlo (MC3).
pascualgroup/seasmig
Epochal and Seasonal Phylogenetic Migration Inference with Full Stochastic Mapping of Sequences and Migration Events
pascualgroup/stochastic-crispr-coevo
pascualgroup/varmodel-test-history
Reproducible history for Kolmogorov-Smirnov testing between different versions.
pascualgroup/varmodel2
pascualgroup/varRdiv
var model for var evolution, malaria transmission, and tracking of immunity