pditommaso
CTO & Co-founder of Seqera Labs. Distributed, parallel and reactive programming. Creator of http://nextflow.io.
Seqera LabsBarcelona, Spain
Pinned Repositories
awesome-nextflow
A curated list of nextflow based pipelines
nextflow
A DSL for data-driven computational pipelines
awesome-ci
A curated list of awesome continuous integration services
awesome-containers
awesome-db
A curated list of awesome DBs
awesome-java
A curated list of awesome Java libraries
awesome-pipeline
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
wave
On-demand containers provisioning service
wave-cli
Command line tool for Wave containers provisioning service
pditommaso's Repositories
pditommaso/awesome-pipeline
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
pditommaso/awesome-java
A curated list of awesome Java libraries
pditommaso/awesome-containers
pditommaso/awesome-db
A curated list of awesome DBs
pditommaso/awesome-k8s
A curated list of awesome Kubernetes tools & resources
pditommaso/vagrant-with-quemu-provider
Allow the use of Vagrant on macOS with x86 VMs
pditommaso/nf-s3-stress-stage
Test script to stress test Nextflow stage dowload
pditommaso/nf-sleep
pditommaso/amazon-ebs-autoscale
Don't run out of disk space on your EC2 instance when generating or working with large files. Automatically add EBS volumes to a filesystem mount point in response to disk utilization.
pditommaso/awesome-markdown
A curated list of awesome Markdown tools inspired by other Awesome lists
pditommaso/awesome-tunnel
A curated list of awesome proxy tunnel tools
pditommaso/bioconda-recipes
Conda recipes for the bioconda channel.
pditommaso/cheat-sheets
My personal Cheat-Sheets for various projects, tools and technologies
pditommaso/ciao
pditommaso/ContainerSSH
ContainerSSH: Launch containers on demand
pditommaso/dragen-test
pditommaso/fuse-device-plugin
kubernetes device plugin for using /dev/fuse without privilege
pditommaso/google-auth
Bare minimal app to generate Google auth token
pditommaso/gpt-prompt-engineer
pditommaso/groovy
Mirror of Apache Groovy
pditommaso/groovy-java21-poc
pditommaso/kaniko
Build Container Images In Kubernetes
pditommaso/mint
Build blazing fast, beautiful, and easy to maintain documentation with MDX
pditommaso/nextflow-gotchas
A collection of unexpected challenges and learnings with nextflow and nf-core.
pditommaso/nf-twin
pditommaso/NFDI4IngScientificWorkflowRequirements
This is a repository to discuss, collect and store the requirements for scientific workflow systems
pditommaso/reports-test-nf
pditommaso/rnaseq
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
pditommaso/rnaseq-nf
A proof of concept of RNAseq pipeline
pditommaso/spillway
A simple, distributed and flexible rate limiter