Pers Lab

Computational Biology Research Group

University of Copenhagen

Pinned Repositories

campbell-2017
Scripts and data files related to Campbell 2016 paper
Language:Python4 4 03
CELLECT
CELLECT (CELL-type Expression-specific integration for Complex Traits)
Language:Python73 8 8919
CELLEX
CELLEX (CELL-type EXpression-specificity)
Language:Jupyter Notebook38 7 339
depict
DEPICT code, instructions and an example
Language:Java48 10 2522
gwas-snps-loci
A simple tool to compute independent SNP and loci based on GWAS data
Language:Python9 2 02
Ludwig-2021
Language:R2 6 10
Ludwig-Diabetes-2021
2 7 00
temporal-brain-expression
Scripts to analyze spatio temporal brain expression of BrainSpan Developmental Transcriptome data
Language:R8 5 07
timshel-2020
Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)
Language:R14 6 14
wgcna-toolbox
Perslab toolbox for Weighted Gene Co-Expression Network Analysis
Language:R5 7 22

Pers Lab's Repositories

perslab/CELLECT
CELLECT (CELL-type Expression-specific integration for Complex Traits)
Language:Python73 8 8919
perslab/depict
DEPICT code, instructions and an example
Language:Java48 10 2522
perslab/CELLEX
CELLEX (CELL-type EXpression-specificity)
Language:Jupyter Notebook38 7 339
perslab/timshel-2020
Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)
Language:R14 6 14
perslab/wgcna-toolbox
Perslab toolbox for Weighted Gene Co-Expression Network Analysis
Language:R5 7 22
perslab/fred-2022
Analysis scripts for fred-2022 NASH project
Language:R2 1 00
perslab/Ludwig-2021
Language:R2 6 10
perslab/Ludwig-Diabetes-2021
2 7 00
perslab/sc_seurat
Scripts for single-cell 'omics analysis
Language:HTML2 1 01
perslab/19-BMI-brain-wgcna
wgcna scripts for BMI brain
Language:R1 6 0
perslab/CUTnTag_analysis
Language:HTML1 1 0
perslab/Merino_2020
Language:Shell1 5 11
perslab/brown-rausch-iscience-2021
Language:R0 6 00
perslab/critical_period
Language:R0 2 00
perslab/Falk-2022
0 5 00
perslab/Kakava-Georgiado-2020
Scripts for making figures as presented in the paper by Kakava-Georgiado 2020
Language:R0 2 00
perslab/Ludwig-AD-2024
Language:R0 5 00
perslab/Lund-Ranea-Robles-2023
Analysis script for Bulk RNA-seq data from hypothalamus
0 5 00
perslab/Petersen-Nature-2024
0 5 00
perslab/Sass-2024
Language:R00
perslab/19-BMI-brain-compare-celltypes
comparisons of celltype results for BMI brain project
Language:R6 0
perslab/19-BMI-brain-genesettests
code for geneset tests for BMI brain paper
Language:R6 01
perslab/Aalling-Todorov-Hassan2024
Language:Jupyter Notebook1 0
perslab/dworzynski-2020
Source code for "Nationwide prediction of type 2 diabetes comorbidities" paper.
Language:Python6 02
perslab/geneNetworkScripts
R scripts for further analysis of gene networks
Language:R1 0
perslab/glp1r_leptin
Language:R5 0
perslab/hypothalamus_atlas
Language:R3 02
perslab/Ludwig-Coester-Gordian-2025
perslab/perslab-sc-library
Python scripts and data files for recurrent tasks
Language:Python4 0
perslab/scpipe
Language:Python7 0