perslab/depict

Issues

• Errors retrieving background loci

  #16 opened 5 years ago by lawchen
  3

• modify r2 to 0.05, the program has been running for a week

  #29 opened 5 months ago by koujiaodahan
  0

• Unable to open link to download reconsituted gene set

  #26 opened 2 years ago by sn-GT
  2

• is plink2 suitable as plink_executable?

  #28 opened 5 months ago by koujiaodahan
  0

• FDR values

  #4 opened 8 years ago by petralenzini
  1

• Using different tissue gene expression file in DEPICT

  #19 opened 4 years ago by kkdey
  1

• OSError: [Errno 13] Permission denied

  #27 opened 2 years ago by AlexYiLuo
  1

• \nCreating directory were results will be saved ({})".format(analysis_path)

  #25 opened 2 years ago by bujnism
  0

• File missing

  #24 opened 2 years ago by AizawaKakeru
  0

• DEPICT v1.194 is no longer available (broken link)

  #23 opened 3 years ago by KallyopeBio
  0

• fixing the seed

  #22 opened 4 years ago by sespesogil
  0

• Run depict with data of genome build hg38

  #21 opened 4 years ago by kkhchan
  0

• No backgrounds have been precomputed

  #20 opened 4 years ago by kkhchan
  0

• DEPICT LOO mode not working

  #18 opened 4 years ago by miaokyle
  0

• No backgrounds have be precomputed for # yet

  #7 opened 7 years ago by MikeDacre
  2

• ArrayIndexOutOfBoundsException

  #17 opened 5 years ago by miaokyle
  0

• something is wrong when input "$ depict.py ./software/depict/example/ldl_teslovich_nature2010.cfg "

  #14 opened 5 years ago by Z199486H
  1

• DEPICT not working with results from HRC imputed data

  #15 opened 5 years ago by oyhel
  0

• Number of permutation files are insufficient

  #13 opened 6 years ago by ZKamali
  1

• Exception / failure when number of unique loci exceeds 1000

  #3 opened 9 years ago by Skybeetle
  2

• Further changes to depict_library.py is required

  #11 opened 7 years ago by jinghuazhao
  0

• network_plot.py issue

  #10 opened 7 years ago by jinghuazhao
  1

• Some data resource are missing

  #8 opened 7 years ago by Bochao1
  1

• Broken link

  #6 opened 8 years ago by zx8754
  0

• Depict v1 rel194 download archive seems to be missing data!

  #5 opened 8 years ago by mverkerk
  0