Pinned Repositories
higlass
Fast, flexible and extensible genome browser.
bwa-pssm
A burrows-wheeler transform-based probabilistic short read mapper.
d3-contouring-example
An example of using different contouring libraries with d3.js.
gene-citation-counts
negspy
Python NGS Repository
roadway_routing
forgi
An RNA manipulation library.
forna
Create force-directed graphs of RNA secondary structures.
pkerpedjiev's Repositories
pkerpedjiev/upload-network
pkerpedjiev/alignment-visualization
pkerpedjiev/zoocos
pkerpedjiev/cistrome-higlass-demo
pkerpedjiev/clodius
Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
pkerpedjiev/d3nver
pkerpedjiev/danielles-matrix
pkerpedjiev/dotfiles
pkerpedjiev/flask-mandelbrot
pkerpedjiev/gcMapExplorer
Genome Contact Map Explorer - gcMapExplorer. Visit:
pkerpedjiev/goofys-docker-test
pkerpedjiev/hg-develop-docker
pkerpedjiev/hg-presentation
pkerpedjiev/hgflask-examples
pkerpedjiev/higlass-develop-docker
pkerpedjiev/higlass-docs-beta
pkerpedjiev/higlass-min-max-line
pkerpedjiev/higlass-multivec
Multivec Tracks for Higlass
pkerpedjiev/higlass-track-template
pkerpedjiev/higlass-unix-time-track
pkerpedjiev/ingredients
pkerpedjiev/minisites
pkerpedjiev/oakland-trees
pkerpedjiev/refseq-genes
pkerpedjiev/s3fs-fuse
FUSE-based file system backed by Amazon S3
pkerpedjiev/scholar.py
A parser for Google Scholar, written in Python
pkerpedjiev/test-scipy-dependency
pkerpedjiev/test2
pkerpedjiev/tibanna
Tibanna is the gas mined in Cloud City that makes Hyperdrives zoom. It's also the pipeline running in the cloud that ensure data is properly processed for 4dn.
pkerpedjiev/z-index-range-selections