QIIME 2

Pinned Repositories

distributions
Language:Dockerfile1 6 65
docs
Language:Python21 14 18758
q2-dada2
QIIME 2 plugin wrapping DADA2
Language:Python19 11 7436
q2-feature-classifier
QIIME 2 plugin supporting taxonomic classification
Language:Python18 11 9238
q2-types
Language:Python16 9 11541
q2cli
Command line interface for QIIME 2
Language:Python19 10 11324
q2galaxy
Generate Galaxy tool descriptions automatically from QIIME 2 actions.
Language:Python19 9 1818
q2studio
Prototype graphical user interface for QIIME 2
Language:JavaScript15 9 5520
q2view-old
A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
Language:JavaScript14 9 6117
qiime2
Official repository for the QIIME 2 framework.
Language:Python472 40 360238

QIIME 2's Repositories

qiime2/qiime2
Official repository for the QIIME 2 framework.
Language:Python472 40 360238
qiime2/docs
Language:Python21 14 18758
qiime2/q2-dada2
QIIME 2 plugin wrapping DADA2
Language:Python19 11 7436
qiime2/q2cli
Command line interface for QIIME 2
Language:Python19 10 11324
qiime2/q2galaxy
Generate Galaxy tool descriptions automatically from QIIME 2 actions.
Language:Python19 9 1818
qiime2/q2-feature-classifier
QIIME 2 plugin supporting taxonomic classification
Language:Python18 11 9238
qiime2/q2-types
Language:Python16 9 11541
qiime2/q2view
A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
Language:TypeScript14 7 11
qiime2/q2-fragment-insertion
Language:Python13 13 3617
qiime2/cancer-microbiome-intervention-tutorial
JupyterBook for QIIME 2 FAES January 2022 workshop
Language:Jupyter Notebook11 6 2515
qiime2/q2-longitudinal
QIIME 2 plugin for paired sample comparisons
Language:Python9 11 8418
qiime2/vm-playbooks
Ansible playbooks for QIIME 2 environments
Language:Shell7 8 3112
qiime2/q2-vsearch
vsearch plugin for QIIME 2
Language:Python6 12 3920
qiime2/q2-diversity
Language:Python4 10 16145
qiime2/q2-fmt
q2-fmt is an all-in-one suite for assessing engraftment extent following Fecal Microbiota Transplants!
Language:Python4 9 3010
qiime2/q2-alignment
Support for multiple sequence alignment in QIIME 2.
Language:Python2 10 2421
qiime2/q2-feature-table
QIIME 2 plugin supporting operations on feature tables.
Language:Python2 11 12937
qiime2/sphinx-ext-qiime2
Language:Python2 8 55
qiime2/distributions
Language:Dockerfile1 6 65
qiime2/q2-emperor
Language:Python1 10 1922
qiime2/q2-stats
Language:Python1 9 37
qiime2/q2-vizard
The first choice of wizard lizards for interactive, generalized microbiome data visualization!
Language:Python1 5 109
qiime2/resources
Source for QIIME 2 Resources page.
Language:TeX14
qiime2/q2-diversity-lib
Language:Python0 8 1311
qiime2/action-library-packaging
Language:Python8 15
qiime2/data302
Language:Python8 410
qiime2/q2-demux
Language:Python11 5120
qiime2/q2lint
Linter for official QIIME 2 software.
Language:Python9 911
qiime2/q2view-gallery
Language:HTML3
qiime2/qiime2.org
qiime2.org source
Language:JavaScript3 22