qiyunzhu
Assistant Professor @ Arizona State University, studying microbiomes, evolution and bioinformatics
Arizona State UniversityTempe, AZ
Pinned Repositories
qiita
Qiita - A multi-omics databasing effort
HGTector
HGTector2: Genome-wide prediction of horizontal gene transfer based on distribution of sequence homology patterns.
AfterPhylo
Perl script for manipulating trees after phylogenetic reconstruction
american-gut-web
The website for the American Gut Project participant portal
BeforePhylo
Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction
binarena
BinaRena-manuscript
utils
Utilities worth sharing with the community
wol
woltka
Woltka: a versatile meta'omic data classifier
qiyunzhu's Repositories
qiyunzhu/woltka
Woltka: a versatile meta'omic data classifier
qiyunzhu/utils
Utilities worth sharing with the community
qiyunzhu/binarena
qiyunzhu/BinaRena-manuscript
qiyunzhu/wol
qiyunzhu/BIO598-2021
BIO/MIC 494/598 Microbiome Data Science
qiyunzhu/bioconda-recipes
Conda recipes for the bioconda channel.
qiyunzhu/biom-format
The Biological Observation Matrix (BIOM) Format Project
qiyunzhu/dsFDR
descrete False Discovery Rate method
qiyunzhu/empress
A very fast and scalable phylogenetic visualization viewer
qiyunzhu/Genordi
Match read alignments and annotated genes in an ordinal scale on genome.
qiyunzhu/HGTector
Genome-wide prediction of horizontal gene transfer events based on Blast hit distribution statistics
qiyunzhu/horizomer
Workflow for detecting genome-wide horizontal gene transfers
qiyunzhu/labman
lab manager for plate maps and sequence flows
qiyunzhu/metadata-ideas
qiyunzhu/q2-chemistree
Hierarchical orderings for mass spectrometry data
qiyunzhu/q2-gneiss
QIIME2 plugin for Gneiss
qiyunzhu/q2-types
qiyunzhu/q2_dsfdr
qiyunzhu/qiyun_tool
Qiyun's test tool
qiyunzhu/qiyunlab.github.io
Qiyun Lab Website
qiyunzhu/qiyunzhu.github.io
Qiyun Zhu's personal website
qiyunzhu/qp-shogun
qiyunzhu/scikit-bio
scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.
qiyunzhu/scikit-bio-feedstock
A conda-smithy repository for scikit-bio.
qiyunzhu/scikit-bio-tutorials
Interactive tutorials for using scikit-bio in biological research
qiyunzhu/SHOGUN
SHallow shOtGUN profiler
qiyunzhu/tax2tree
Automated taxonomy decoration onto a tree
qiyunzhu/taxa-assign-benchmarking
Snakemake workflow for benchmarking taxonomy assignments
qiyunzhu/Travelers-Diarrhea-MAGs
Metagenomic Assembled Genomes from Travelers' Diarrhea Subjects