radxtools/collageradiomics

Issues

• 3d slicer extension issue with label maps

  #124 opened a year ago by PrathyushVC
  0

• x-Dimension of haralick features is not aligned with mask width

  #121 opened 2 years ago by akanksha28pathak
  2

• NaN values during 3D feature extraction

  #97 opened 4 years ago by pavi1303
  4

• Unable to finish CLI processing for certain images

  #89 opened 4 years ago by sarthakpati
  14

• Add progress output.

  #91 opened 4 years ago by nathanhillyer
  0

• Error during implementation

  #95 opened 4 years ago by pavi1303
  5

• Support masks that expand across the full image.

  #92 opened 4 years ago by nathanhillyer
  1

• Enforce a minimum size of 50x50 for collage region.

  #93 opened 4 years ago by nathanhillyer
  1

• Slicer extension doesn't output both angles when phi and theta are selected

  #90 opened 4 years ago by nathanhillyer
  0

• Consider importing functions directly into collageradiomics codebase from the heavyweight dependencies

  #85 opened 4 years ago by nathanhillyer
  0

• Finish out CLI stub

  #86 opened 4 years ago by nathanhillyer
  1

• Error with Nifti Images.

  #84 opened 4 years ago by umgpy
  4

• Prevent external image editor from opening when running the Jupyter examples.

  #52 opened 4 years ago by nathanhillyer
  1

• Use logger instead of verbose log parameter

  #77 opened 4 years ago by nathanhillyer
  1

• Use mypy for static typing

  #60 opened 4 years ago by robtoth
  1

• More input sanitization

  #53 opened 4 years ago by nathanhillyer
  4

• Use more specific exceptions than just "Exception"

  #59 opened 4 years ago by robtoth
  1

• Initial GUI Implementation

  #56 opened 4 years ago by nathanhillyer
  1

• Run Slicer input/output without integration

  #57 opened 4 years ago by nathanhillyer
  1

• Support DICOM input

  #58 opened 4 years ago by nathanhillyer
  1

• Use python typing library

  #79 opened 4 years ago by nathanhillyer
  1

• collageradiomics requires calling import twice

  #42 opened 4 years ago by robtoth
  1

• Integrate CLI with our data input into our existing core docker image.

  #43 opened 4 years ago by robtoth
  0

• Split utility functions into separate file

  #62 opened 4 years ago by robtoth
  1

• Slicer Extension

  #70 opened 4 years ago by nathanhillyer
  0

• Create separate classifier module

  #75 opened 4 years ago by nathanhillyer
  1

• Address Slicer Feedback

  #83 opened 4 years ago by nathanhillyer
  1

• Include image in manifest.in file

  #80 opened 4 years ago by nathanhillyer
  0

• Move common code into common repo

  #81 opened 4 years ago by nathanhillyer
  1

• Create organizational accounts for pypy and readthedocs

  #78 opened 4 years ago by nathanhillyer
  0

• Add warning for large masks

  #72 opened 4 years ago by nathanhillyer
  0

• Make sure at least one dominant angle is selected before running collage in Slicer.

  #74 opened 4 years ago by nathanhillyer
  0

• Add collageradiomics to mrhub

  #73 opened 4 years ago by nathanhillyer
  0

• Fix extend_above and extend_below logic

  #71 opened 4 years ago by nathanhillyer
  0

• Automate version update for readthedocs.

  #69 opened 4 years ago by nathanhillyer
  0

• Add GitHub action for building docker images.

  #68 opened 4 years ago by nathanhillyer
  0

• Remove the Multiple Images & Collection

  #64 opened 4 years ago by robtoth
  2

• Extract Single Feature in Get Function

  #65 opened 4 years ago by robtoth
  0

• Move Visualization Code from Core Module to Jupyter Notebook

  #66 opened 4 years ago by robtoth
  0

• Support 3D Images Natively

  #49 opened 4 years ago by robtoth
  0

• Remove from_rectangle and only support mask inputs

  #61 opened 4 years ago by robtoth
  0

• Haralick feature list not working for multiple images.

  #51 opened 4 years ago by nathanhillyer
  1

• Investigate switching to YYYY.MM.DD versioning scheme.

  #63 opened 4 years ago by nathanhillyer
  0

• Add contributor guide

  #55 opened 4 years ago by nathanhillyer
  0

• Add code style guide.

  #54 opened 4 years ago by nathanhillyer
  0

• Localhost not displaying Jupyter Examples

  #44 opened 4 years ago by tgd15
  7

• Improve Initial ReadTheDocs Documentation with More Granular and Detailed Documentation

  #48 opened 4 years ago by robtoth
  0

• Documentation Suggestion

  #47 opened 4 years ago by tgd15
  2

• Binary mask needs to be converted into 0 and 255 instead of 0 and 1 to extract features

  #45 opened 4 years ago by pranjalvaidya
  6

• User documentation

  #46 opened 4 years ago by PrathyushVC
  2