rdemets's Stars
fractal-napari-plugins-collection/napari-feature-classifier
guiwitz/napari-serialcellpose
Kapoorlabs-CAPED/vollseg-napari
Napari plugin for vollseg
rdemets/napari-yolov5
sebi06/napari-czann-segment
Semantic Segmention and Image2Image using DeepLearning ONNX models packaged as *.czann files.
zcqwh/napari-aideveloper
napari-aideveloper cookiecutter template
haesleinhuepf/napari-folder-browser
rdemets/CorrSight-Tilling-ImageJ
rdemets/3D-Microwell-Matlab
rdemets/Cell-Counting-Stardist-ImageJ
Work In Progress
rdemets/Colocalization-IndividualCells-ImageJ
rdemets/Epithelium-Thickness-ImageJ
Measure thickness distribution of binary image in Fiji
rdemets/FA-Quantif-Matlab
rdemets/Fibers-Segmentation-QuPath
Code mostly written by Sebastien Tosi (DBI) for muscle fibers segmentation and nuclei analysis in QuPath
rdemets/FISH-2colors-Cellpose-ImageJ
rdemets/FISH-Cellpose-ImageJ
rdemets/General-Tools-ImageJ
Non exhaustive list of useful small ImageJ macro
rdemets/Labkit-OrientationJ-Batch-ImageJ
Batch segment using Labkit, Rotate image using OrientationJ and measure angles
rdemets/LineProfile-Matlab
rdemets/Membrane-Intensity-ImageJ
Membrane intensity measurement in ImageJ with Cellpose segmentation
rdemets/Multiplex-registration-ImageJ
rdemets/Multiplex-registration-ZEN
rdemets/Organoid-Intensity-ImageJ
rdemets/ROI-Grid-ImageJ
rdemets/ROI-interpolation-ImageJ
Work in Progress
rdemets/Stardist-macro-QuPath
rdemets/Tile-Classification-ZEN
Use Intellesis pixel classifier on an image and classify the tiles depending on the max population
rdemets/Unets-Multiclass
Unets notebook developed while I was working in NUS for multiclass 3D segmentation
rdemets/Vertical-Line-Crop-ImageJ
rdemets/Zeiss-Methods-ImageJ
Work in Progress