rhngla

rhngla's Stars

• faif/python-patterns

  A collection of design patterns/idioms in Python

  Language:Python40.6k1.6k886.9k

• eriklindernoren/ML-From-Scratch

  Machine Learning From Scratch. Bare bones NumPy implementations of machine learning models and algorithms with a focus on accessibility. Aims to cover everything from linear regression to deep learning.

  Language:Python24.1k937734.6k

• rfordatascience/tidytuesday

  Official repo for the #tidytuesday project

  Language:HTML6.9k5724672.4k

• KevinMusgrave/pytorch-metric-learning

  The easiest way to use deep metric learning in your application. Modular, flexible, and extensible. Written in PyTorch.

  Language:Python6k62515658

• synercys/annotated_latex_equations

  Examples of how to create colorful, annotated equations in Latex using Tikz.

  Language:TeX3.8k383216

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.2k24823989

• Phlya/adjustText

  A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.

  Language:Jupyter Notebook1.5k1015687

• pbloem/former

  Simple transformer implementation from scratch in pytorch.

  Language:Python1.1k2231170

• dcai-course/dcai-lab

  Lab assignments for Introduction to Data-Centric AI, MIT IAP 2024 👩🏽‍💻

  Language:Jupyter Notebook437135155

• openproblems-bio/openproblems

  Formalizing and benchmarking open problems in single-cell genomics

  Language:Shell321718581

• civisanalytics/python-glmnet

  A python port of the glmnet package for fitting generalized linear models via penalized maximum likelihood.

  Language:Python262764459

• royerlab/napari-chatgpt

  A napari plugin to process and analyse images with chatGPT!

  Language:CSS251112726

• lasso-net/lassonet

  Feature selection in neural networks

  Language:Python21866154

• NBISweden/workshop-scRNAseq

  Single cell RNA sequencing analysis course

  Language:HTML19744999

• AmeliaMN/STAT220-labs

  Pre-lab exercises for STAT 220 labs at the University of St Thomas

  812213

• vsitzmann/pytorch_prototyping

  Custom pytorch modules with sane default parameters useful for model prototyping. (U-Net, upsampling, downsampling...)

  Language:Python655014

• ZWMiller/machine_learning_from_scratch

  A place to hold various "from scratch" machine learning algorithms developed in Python as pedagogical tools.

  Language:Jupyter Notebook6011028

• scverse/scvi-tutorials

  Notebooks used in scvi-tools tutorials

  Language:Jupyter Notebook4675225

• kuleshov-group/dgm-resources

  Language:HTML42217

• Gabe-YHLee/NRAE-public

  Language:Python28102

• gwgundersen/dpcca

  Code for the paper "End-to-end training of deep probabilistic CCA on paired biomedical observations".

  Language:Python25215

• Gabe-YHLee/IRVAE-public

  Language:Jupyter Notebook24114

• solevillar/Inference_and_Representation

  Language:TeX22607

• wangxu-scu/DeepCCA

  Deep Canonical Correlation Analysis implemented with tensorflow

  Language:Python14324

• iancovert/dl-selection

  Feature selection for deep learning models.

  Language:Python13102

• milo-lab/cellular_turnover

  Language:Jupyter Notebook11203

• AllenInstitute/coupledAE-patchseq

  Multimodal data alignment and cell type analysis with coupled autoencoders.

  Language:Jupyter Notebook8541

• AmirAlavi/scipr

  Single Cell Iterative Point set Registration (SCIPR) to align scRNA-seq data

  Language:Python3341

• dyf/blenderspin

  Language:Python2301

• AmirAlavi/sc-alignment-benchmarking

  Supporting data and benchmarking software for our SCIPR paper. (Under Construction)

  Language:Jupyter Notebook1290