rhysf

Senior Lecturer in Bioinformatics

Pinned Repositories

RepeatModeler
De-Novo Repeat Discovery Tool
Language:Perl185 8 23923
2speed_genomes
Code for identifying signatures of 2 speed genomes
Language:Perl4 1 00
allele_frequencies
calculate allele frequencies from mpileup format
Language:Perl21
Biscap
Binomial SNP-caller from Pileup (Biscap) and comparison of FDR scripts
Language:Perl3 2 01
Chipseq_analysis_tools
CAT: ChIPseq Analysis Tools
Language:Perl1 1 00
Diamond2GO
Language:Perl18 2 01
ECATools
Scripts to work with 'Entirely Covered in All' (ECA) positions from VCFs (i.e. sites most useful for phylogenetics)
Language:Perl1 1 00
FSTwindows
Calculate FST values across sliding windows
Language:Perl1 1 00
HaplotypeTools
A toolkit for identifying recombination and recombinant genotypes
Language:Perl20 6 23
Synima
Synteny Imager
Language:Perl60 4 478

rhysf's Repositories

rhysf/Synima
Synteny Imager
Language:Perl60 4 478
rhysf/HaplotypeTools
A toolkit for identifying recombination and recombinant genotypes
Language:Perl20 6 23
rhysf/Diamond2GO
Language:Perl18 2 01
rhysf/2speed_genomes
Code for identifying signatures of 2 speed genomes
Language:Perl4 1 00
rhysf/Biscap
Binomial SNP-caller from Pileup (Biscap) and comparison of FDR scripts
Language:Perl3 2 01
rhysf/allele_frequencies
calculate allele frequencies from mpileup format
Language:Perl21
rhysf/Chipseq_analysis_tools
CAT: ChIPseq Analysis Tools
Language:Perl1 1 00
rhysf/ECATools
Scripts to work with 'Entirely Covered in All' (ECA) positions from VCFs (i.e. sites most useful for phylogenetics)
Language:Perl1 1 00
rhysf/FSTwindows
Calculate FST values across sliding windows
Language:Perl1 1 00