rjsicko

rjsicko's Stars

• trimstray/the-book-of-secret-knowledge

  A collection of inspiring lists, manuals, cheatsheets, blogs, hacks, one-liners, cli/web tools and more.

  146k2.5k09.5k

• f/awesome-chatgpt-prompts

  This repo includes ChatGPT prompt curation to use ChatGPT better.

  Language:HTML112k1.4k015.3k

• godotengine/godot

  Godot Engine – Multi-platform 2D and 3D game engine

  Language:C++90.3k1.5k53k21.1k

• gothinkster/realworld

  "The mother of all demo apps" — Exemplary fullstack Medium.com clone powered by React, Angular, Node, Django, and many more

  Language:TypeScript80.5k1.5k5367.3k

• grafana/grafana

  The open and composable observability and data visualization platform. Visualize metrics, logs, and traces from multiple sources like Prometheus, Loki, Elasticsearch, InfluxDB, Postgres and many more.

  Language:TypeScript64.5k1.3k37.6k12.1k

• danielmiessler/fabric

  fabric is an open-source framework for augmenting humans using AI. It provides a modular framework for solving specific problems using a crowdsourced set of AI prompts that can be used anywhere.

  Language:Go23.9k3214852.6k

• briefercloud/briefer

  Dashboards and notebooks in a single place. Create powerful and flexible dashboards using code, or build beautiful Notion-like notebooks and share them with your team.

  Language:TypeScript3.4k1488188

• soedinglab/MMseqs2

  MMseqs2: ultra fast and sensitive search and clustering suite

  Language:C1.4k32824195

• nea/MarkdownViewerPlusPlus

  A Notepad++ Plugin to view a Markdown file rendered on-the-fly

  Language:C#1.2k51156141

• kcleal/gw

  Genome browser and variant annotation

  Language:C++2756227

• dsoprea/PyInotify

  An efficient and elegant inotify (Linux filesystem activity monitor) library for Python. Python 2 and 3 compatible.

  Language:Python246156673

• pjedge/longshot

  diploid SNV caller for error-prone reads

  Language:Rust18359526

• OpenGene/MutScan

  Detect and visualize target mutations by scanning FastQ files directly

  Language:C149221538

• OpenGene/repaq

  A fast lossless FASTQ compressor with ultra-high compression ratio

  Language:C124222019

• biowasm/aioli

  Framework for building fast genomics web tools with WebAssembly and WebWorkers

  Language:JavaScript1044199

• ding-lab/CharGer

  Characterization of Germline variants

  Language:Python97193737

• datavzrd/datavzrd

  A tool to create visual HTML reports from collections of CSV/TSV tables

  Language:Rust903744

• imgag/ClinCNV

  Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data

  Language:R7110442

• aakechin/NGS-PrimerPlex

  NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design

  Language:Python5455921

• SACGF/variantgrid

  VariantGrid public repo

  Language:Python2341k2

• SD-Genomics/DeviCNV

  Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data

  Language:Python17234

• bihealth/digestiflow-server

  :cocktail: Web-based database system for flow cell management (incl. REST API)

  Language:Python157583

• gear-genomics/silica

  In-silico PCR amplification on complete genomes

  Language:JavaScript9510

• nanoporetech/cronkite

  One **hell** of a reporter

  Language:TypeScript8210

• brentp/bamject

  DO NOT USE inject variants (snps/indels) from a vcf into a bam efficiently.

  Language:Nim731

• gear-genomics/teal

  Sanger Trace Viewer

  Language:JavaScript7622

• broadinstitute/polyphonia

  Detects cross-contamination in sequence data.

  Language:Perl4110

• gear-genomics/sage

  Sanger Trace Alignment

  Language:JavaScript4500

• sbilge/nextflow-clinvap

  Language:Python46

• Genetalks/PrimerScore2

  a robust high-throughput primer design tool that designs multiple types of primers in one click

  Language:Perl3213