rjsorr

Pinned Repositories

• kraken2

  The second version of the Kraken taxonomic sequence classification system

  Language:C++72930834273

• CanSNPer2

  CanSNPer2: A toolkit for SNP-typing bacterial genomes.

  Language:Python67322

• metaMDBG

  MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.

  Language:C++1035223

• Bracken

  Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

  Language:C++2931325950

• genome_updater

  Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy

  Language:Shell14614315

rjsorr's Repositories