robbert-harms/MDT

Issues

• Number of processed voxels

  #61 opened 4 months ago by ghammad
  1

• issues in NODDI maps using MDT fitting

  #60 opened 7 months ago by rosella1234
  10

• Documentation links

  #59 opened 8 months ago by colon-perez
  1

• Singularity runs, but gives semi-random results

  #42 opened 3 years ago by celstark
  8

• Stuck at "We will use the optimizer Powell with default settings."

  #58 opened a year ago by fkm24
  2

• `get_data` and `np.bool`, possibly others, trigger deprecation errors from NiBabel as of nibabel>=5.0.0 and numpy>=1.24.0

  #57 opened a year ago by kimjetwav
  1

• Running MDT via Docker

  #56 opened a year ago by rosella1234
  1

• Installation on Centos7

  #55 opened a year ago by rosella1234
  0

• Running test file

  #54 opened a year ago by stillill
  2

• pyopencl.cffi_cl.RuntimeError: clBuildProgram failed: BUILD_PROGRAM_FAILURE -

  #53 opened a year ago by stillill
  4

• RuntimeError: clEnqueueNDRangeKernel failed: OUT_OF_RESOURCES in fitting with CHARMED_r2

  #52 opened a year ago by StefaniaOliviero
  0

• T1 fit

  #51 opened a year ago by StefaniaOliviero
  0

• Issue with invalid array size

  #49 opened 2 years ago by franciscofritz
  2

• mdt-list-models is empty, unable to select expected models for fit

  #50 opened 2 years ago by asingh226
  0

• Numpy errors

  #48 opened 2 years ago by mrgrist
  1

• fixing parameters in fit process

  #47 opened 2 years ago by StefaniaOliviero
  0

• Value Error cannot find model 'NODDI'

  #44 opened 2 years ago by ucigrangers
  3

• AttributeError: module 'pyopencl.cltypes' has no attribute '4'

  #45 opened 2 years ago by dmd
  5

• Noise estimation

  #41 opened 3 years ago by araikes
  8

• Initialization

  #43 opened 2 years ago by StefaniaOliviero
  2

• interpretation NODDI output

  #31 opened 4 years ago by SanRut
  6

• How to compose a new composite model

  #40 opened 3 years ago by StefaniaOliviero
  1

• Difference between CHARMED models

  #37 opened 3 years ago by StefaniaOliviero
  1

• installation on ubuntu 20.04

  #28 opened 3 years ago by SiyaMRPhy
  1

• MDT kurtosis vs DKE

  #26 opened 3 years ago by droediger
  2

• Open CL errors

  #39 opened 3 years ago by mwagshul
  14

• Confusing error message "Double operator in model listing."

  #38 opened 3 years ago by lukeje
  1

• Threading when using CPUs

  #36 opened 3 years ago by celstark
  4

• Access tu more GPU nodes

  #35 opened 4 years ago by StefaniaOliviero
  3

• option --patience

  #34 opened 4 years ago by StefaniaOliviero
  2

• RuntimeError: clEnqueueNDRangeKernel failed: OUT_OF_RESOURCES

  #33 opened 4 years ago by StefaniaOliviero
  2

• Array problems

  #32 opened 4 years ago by franciscofritz
  1

• Test fails

  #30 opened 4 years ago by eglerean
  2

• Windows installation - GPU not listed in OpenCL devices list

  #29 opened 4 years ago by maximevanegroo
  0

• very low MD values after fitting Tensor Model

  #27 opened 4 years ago by SanRut
  2

• MDT crash

  #25 opened 4 years ago by Nerooh
  8

• Agreement between MDT and Matlab Toolbox

  #24 opened 4 years ago by Croall
  2

• Building MDT

  #23 opened 5 years ago by arash-n
  2

• NODDI fit error

  #22 opened 5 years ago by arash-n
  3

• mdt-model-fit hung after logging "Starting post-processing"

  #21 opened 5 years ago by mastrogiovanni
  3

• Singularity.intel build successful | However I face the following error when running exec with singularity

  #18 opened 5 years ago by finalelement
  10

• GPU not recognized in docker image created using Dockerfile.intel

  #19 opened 5 years ago by mastrogiovanni
  1

• mdt.sample_model > OSError: [Errno 95] Operation not supported:

  #17 opened 5 years ago by SanRut
  5

• Free water imaging and single-shell DTI

  #16 opened 5 years ago by ElijahMak
  5

• pyopencl._cl.RuntimeError

  #12 opened 5 years ago by ElijahMak
  21

• Missing model names in get_optimization_inits

  #15 opened 5 years ago by cprmellema
  2

• Failure when using custom gradient deviations file

  #14 opened 6 years ago by akhanf
  2

• mdt-model-fit runs a different model than specified

  #13 opened 6 years ago by akhanf
  2

• How to get exact same output as the NODDI Matlab Toolbox?

  #9 opened 6 years ago by johnaeanderson
  9

• ValueError: The list of CL Environments is empty.

  #8 opened 6 years ago by ForrestCKoch
  3