safrant
Clinical laboratory tech turned computer programmer. I work mostly in biomedical applications and ontologies.
Mayo ClinicVIrginia, USA
Pinned Repositories
cadsr-cdecurate
The CDE Curation Tool supports creation and editing of Data Element Concepts, Value Domains, and Data Elements.
cadsr-sentinel
The caDSR Sentinel tool allows users to create and manage Alert Definitions for content in the caDSR
coal
Cross-lingual Ontology Alignment
cts2_nonOSGI
PoC on removing OSGI from LexEVS CTS2
evs-compare
lexevs
lexevs-remote
lexevs-system-test
Docker based strategy for building, deploying, and testing lexevs, lexevs-remote, and lexevs-service (CTS2).
LogMap
Localized version of University of Oxford's LogMap
report-exporter
export reports from lexevs queries
safrant's Repositories
safrant/cadsr-sentinel
The caDSR Sentinel tool allows users to create and manage Alert Definitions for content in the caDSR
safrant/coal
Cross-lingual Ontology Alignment
safrant/cts2_nonOSGI
PoC on removing OSGI from LexEVS CTS2
safrant/evs-compare
safrant/lexevs
safrant/lexevs-remote
safrant/lexevs-system-test
Docker based strategy for building, deploying, and testing lexevs, lexevs-remote, and lexevs-service (CTS2).
safrant/report-exporter
export reports from lexevs queries
safrant/evs-explore
new terminology browser application
safrant/evs-history
Protégé 5 plugin for displaying EVS history
safrant/evsrestapi
safrant/IJSettings
IntelliJ settings repository
safrant/jena
Apache Jena
safrant/lexevs-service
A CTS2 Framework Service Plugin based on LexEVS
safrant/lexevs-service-rest-tests
Test suite for lexevs service (CTS2) REST service.
safrant/LexEVS_Distributed_Client
safrant/lucene-search-tab
A Protégé 5 plugin providing a GUI for Lucene search
safrant/metabrowser-extension
safrant/metaproject
safrant/metaproject-admin
Protégé plugin for managing metaproject and client/server configuration
safrant/nci-report-writer2
SPARQL-based Report Writer query and reporting tool.
safrant/nci-term-browser
The NCI Term Browser is a web-based browser that allows users to search all terminologies, value sets and mappings on the LexEVS terminology server, to browse individual sources, and to easily follow the many links that connect them.
safrant/ops-data-conversion
safrant/ops-owl-applications
safrant/protege-client
Provides client functionality for the Protege Desktop application to connect to an OWL Ontology Server.
safrant/protege-server
An OWL ontology server for OWL API programs, e.g., Protege Desktop.
safrant/streamDeck-weatherPlugin
Popular Stream Deck plugin for Weather reporting
safrant/super-csv
A fast, programmer-friendly, free CSV library for Java
safrant/URI_Resolver
Resolves URIs for CTS2
safrant/xmihandler
The XMI Handler provides a set of APIs to read from and write into XMI files. The XMI Handler parses a given XMI file and represent the model in Java objects. The APIs work with both ArgoUML and Enterprise Architect created XMI models.