sanjaynagi/AnoPrimer

Issues

• refactor and create results class with methods

  #46 opened 8 days ago by sanjaynagi
  0

• add primer3 options from multiply

  #45 opened 24 days ago by sanjaynagi
  0

• add support to check pre-existing primers

  #12 opened a year ago by sanjaynagi
  0

• add funestus support

  #26 opened a year ago by sanjaynagi
  0

• Forbidden control characters in expression in Workshop 6's module 4

  #39 opened a year ago by jonbrenas
  4

• make a faq on the documentation

  #38 opened a year ago by sanjaynagi
  0

• Add support for primer3-py 2.0.0

  #31 opened a year ago by sanjaynagi
  0

• add docstrings to all public functions, make jupyter book

  #28 opened a year ago by sanjaynagi
  0

• report exact alternate alleles

  #1 opened a year ago by sanjaynagi
  1

• add genomic primer span to primer df

  #33 opened a year ago by sanjaynagi
  0

• Cannot install on Python 3.10

  #29 opened a year ago by alimanfoo
  3

• add support for CNVs

  #3 opened a year ago by sanjaynagi
  2

• optimise AgamPrimer with snakeviz and numba

  #10 opened a year ago by sanjaynagi
  1

• A scoring function for oligo binding

  #16 opened a year ago by sanjaynagi
  1

• make exon-exon junctions for cDNA optional

  #24 opened 2 years ago by sanjaynagi
  0

• Change target argument to region string

  #21 opened 2 years ago by sanjaynagi
  0

• in long notebook move ag1000g cohort choice in colab form at beginning

  #20 opened 2 years ago by sanjaynagi
  2

• rename qPCR to cDNA

  #17 opened 2 years ago by sanjaynagi
  0

• allow the design of cDNA primers + probe

  #18 opened 2 years ago by sanjaynagi
  0

• allow user to configure paths to save outputs to

  #13 opened 2 years ago by sanjaynagi
  0

• Declare dependencies in package metadata

  #8 opened 2 years ago by alimanfoo
  1

• add tests and CI with github actions

  #6 opened 2 years ago by sanjaynagi
  1

• add blast support with gget

  #7 opened 2 years ago by sanjaynagi
  2

• add sample query option to Ag1000g pop selection

  #5 opened 2 years ago by sanjaynagi
  1

• report sample size of Ag1000g pops

  #4 opened 2 years ago by sanjaynagi
  1

• support for probes

  #2 opened 2 years ago by sanjaynagi
  1