sbmlteam/moccasin

Issues

• array oprator error

  #66 opened 2 years ago by UpamalikaSamarawickrama
  1

• Suggest to loosen the dependency on halo

  #65 opened 2 years ago by Agnes-U
  0

• ode15s support

  #63 opened 6 years ago by rheiland
  1

• Acknowledge Python packages used

  #62 opened 6 years ago by mhucka
  0

• Fix garbled icon on Windows

  #58 opened 7 years ago by mhucka
  1

• convert to use new version of Halo

  #61 opened 6 years ago by mhucka
  0

• Improve titles of components in mac .pkg installer

  #60 opened 7 years ago by mhucka
  0

• The link to download self-contained program is broken

  #59 opened 7 years ago by funasoul
  1

• Handle multiple input files

  #43 opened 7 years ago by mhucka
  0

• Add option to produce SBML Level 2 output

  #35 opened 7 years ago by mhucka
  1

• Provide simple way of specifying compartments

  #25 opened 7 years ago by mhucka
  0

• Improve test cases to get 100% code coverage

  #37 opened 7 years ago by mhucka
  0

• Octave compatibility broken

  #57 opened 7 years ago by mhucka
  0

• Fix parsing of code after function definitions

  #30 opened 7 years ago by mhucka
  0

• Fix parser to recognize this as a variable

  #31 opened 7 years ago by mhucka
  0

• Fix GUI issues with large fonts

  #33 opened 7 years ago by mhucka
  0

• Do consistency checks on the input

  #34 opened 7 years ago by mhucka
  0

• Detect if Biocham service hangs

  #24 opened 7 years ago by mhucka
  0

• Provide more diagnostics and feedback esp. w.r.t. MATLAB input

  #29 opened 7 years ago by mhucka
  2

• Provide self-contained application or image

  #48 opened 7 years ago by mhucka
  1

• macOS menubar and Dock display "Python" instead of application name

  #55 opened 7 years ago by mhucka
  1

• Cannot type in pathname field in GUI interface

  #56 opened 7 years ago by mhucka
  1

• Improve installation process

  #26 opened 7 years ago by mhucka
  13

• Document more of how the converter works

  #27 opened 7 years ago by mhucka
  0

• adjust small GUI element misalignments

  #32 opened 7 years ago by mhucka
  1

• Correctly parsed assignment rule is incorrect in kinetic law

  #53 opened 7 years ago by willigott
  6

• SBML is incomplete when .* is used instead of *

  #51 opened 7 years ago by willigott
  3

• SBML is incomplete when large parameter values are used

  #52 opened 7 years ago by willigott
  2

• fix extreme slowness of Matlab parser

  #49 opened 7 years ago by mhucka
  2

• combine moccasin_CLI and moccasin_GUI into one module interface

  #50 opened 7 years ago by mhucka
  1

• moccasin gui won't launch

  #46 opened 7 years ago by fbergmann
  6

• Update `moccasin/version.py`

  #22 opened 7 years ago by mhucka
  1

• xpp input format?

  #47 opened 7 years ago by fbergmann
  4

• Tests taking too long & causing Travis builds to fail

  #45 opened 7 years ago by mhucka
  5

• Have we solved libsbml install issue for tox?

  #28 opened 7 years ago by mhucka
  2

• Improve setup.py

  #23 opened 7 years ago by mhucka
  2

• Update copyrights

  #21 opened 7 years ago by mhucka
  1

• Usage in run-syntax-tests.py need to correct

  #44 opened 7 years ago by georgethrax
  1

• Work on first implementation of the Fages algorithm.

  #38 opened 7 years ago by mhucka
  0

• Translate to Numpy

  #40 opened 7 years ago by mhucka
  0

• Handle simple conditional statements

  #41 opened 7 years ago by mhucka
  0

• Handle loading .mat files

  #42 opened 7 years ago by mhucka
  0

• Implement kind analysis for MATLAB symbols

  #39 opened 7 years ago by mhucka
  0

• Add a "how to contribute" guide

  #36 opened 7 years ago by mhucka
  0

• Write release process in wiki page

  #18 opened 7 years ago by mhucka
  1

• Add code of conduct

  #17 opened 7 years ago by mhucka
  1

• broken link in main readme file

  #19 opened 7 years ago by uludag
  3

• Conversion failure for files with no overall function

  #20 opened 7 years ago by mhucka
  1

• Moccasin GUI fails to run on MacOS Sierra

  #15 opened 7 years ago by mhucka
  1

• Videos for demos

  #14 opened 8 years ago by mhucka
  1