schultzm

schultzm's Stars

• realpython/python-guide

  Python best practices guidebook, written for humans.

  Language:Batchfile28.5k1.4k2675.8k

• anse-app/anse

  Supercharged experience for multiple models such as ChatGPT, DALL-E and Stable Diffusion.

  Language:TypeScript1.9k1771433

• shenwei356/seqkit

  A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

  Language:Go1.3k29442160

• biotite-dev/biotite

  A comprehensive library for computational molecular biology

  Language:Python70716189103

• brentp/mosdepth

  fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

  Language:Nim70422217101

• mit-han-lab/fastcomposer

  [IJCV] FastComposer: Tuning-Free Multi-Subject Image Generation with Localized Attention

  Language:Python676203338

• genome/bam-readcount

  Count bases in BAM/CRAM files

  Language:CMake309559496

• rrwick/Filtlong

  quality filtering tool for long reads

  Language:C++303143928

• marbl/MashMap

  A fast approximate aligner for long DNA sequences

  Language:C++272175039

• The-Sequence-Ontology/Specifications

  GFF and GVF specification documents

  211262891

• sanger-pathogens/ariba

  Antimicrobial Resistance Identification By Assembly

  Language:Python1722212555

• bionitio-team/bionitio

  Demonstrating best practices for bioinformatics command line tools

  Language:Shell11675126

• arvestad/alv

  A console-based alignment viewer

  Language:Python10731613

• angelovangel/nxf-kraken2

  A simple nextflow pipeline for running kraken2 and bracken in a docker container

  Language:Nextflow20347

• microbinfie-hackathon2020/CSIS

  Code Safety Inspection Service

  204714

• schultzm/entrez_direct_tut

  Tutorial on using E-utilities

  19401

• gringer/RichPoreTK

  Tools for processing FAST5 files from Oxford Nanopore Devices

  Language:R6201

• metagenlab/GENCOV

  Language:Python5410

• paulstretenowich/nf-core-viralrecon

  See the main fork of this repository here >>>

  Language:Nextflow1003