scverse/scanpy_usage

Issues

• Assign cell types to clusters

  #20 opened 2 years ago by Kristina1234444
  0

• Export to SPRING error

  #19 opened 4 years ago by nroak
  0

• memory

  #13 opened 6 years ago by ShobiStassen
  2

• Export to spring issue (AttributeError: 'numpy.ndarray' object has no attribute 'tocsc')

  #18 opened 5 years ago by sfortma2
  0

• Cannot open louvain.csv.gz

  #15 opened 5 years ago by BSharmi
  2

• unable to find genes when export to SPRING object

  #14 opened 6 years ago by MichaelPeibo
  4

• Problem with sc.pp.highly_variable_genes()

  #12 opened 6 years ago by Leprechaun777
  1

• can't reproduce the tSNE plot of zheng17.

  #10 opened 6 years ago by ponnhide
  4

• Incorrect reference doi in seurat.ipynb

  #7 opened 6 years ago by le-ander
  1

• can't replicate 170505_seurat/seurat.ipynb notebook

  #6 opened 6 years ago by fidelram
  6

• score_genes_cell_cycle not running in Scanpy 1.1a1+15.g1570f7c

  #4 opened 6 years ago by mbuttner
  1

• Louvain method raises segmentation fault

  #2 opened 6 years ago by anilbey
  8

• Can't download bulk labels in project example zheng17

  #3 opened 6 years ago by PhungVanDuy
  1

• BPMC data link

  #1 opened 7 years ago by hkoohy
  1