Pinned Repositories
AMR_pipeline
Antibody_analysis
ASAP
Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
beyond-bar-and-box-plots
Hands–on code to create and style chart alternatives with ggplot2
Bioinformatics_introduction
BioInstaller
A comprehensive R package to integrate bioinformatics resources, such as software/script and database.
Biological_databases_API
An introduction to Biological Databases and how the API can be used to access data
brewpitopes
Set of tools to manage epitope prediction results from linear and structural origin and to integrate a pipeline of prioritization filters.
btp-workshop-ngs
Bioinformatics Training Platform (BTP) Workshop: Introduction to NGS
sebymusundi's Repositories
sebymusundi/AMR_pipeline
sebymusundi/Antibody_analysis
sebymusundi/Bioinformatics_introduction
sebymusundi/brewpitopes
Set of tools to manage epitope prediction results from linear and structural origin and to integrate a pipeline of prioritization filters.
sebymusundi/conserved_proteins
sebymusundi/epitope_analysis
sebymusundi/epitopeprediction
A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
sebymusundi/fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
sebymusundi/gene_coexpression
sebymusundi/genetic_variation
sebymusundi/helpful_commands
Command-line tools, commands, and code snippets for performing routine data processing and bioinformatics tasks.
sebymusundi/iqtree
iqtree_analysis
sebymusundi/Metagenomic_analysis_miniproject
BOSS mini project on metagenomic analysis
sebymusundi/metatranscriptomics
sebymusundi/new
sebymusundi/ODEs
sebymusundi/python-tutorial
A Python 3 programming tutorial for beginners.
sebymusundi/python_tutorial
sebymusundi/Python_Tutorials
Python tutorials in both Jupyter Notebook and youtube format.
sebymusundi/R_programming_training
sebymusundi/sebymusundi
Config files for my GitHub profile.
sebymusundi/sebymusundi.github.io
sebymusundi/seqtk
Toolkit for processing sequences in FASTA/Q formats
sebymusundi/simple_RNA-seq
sebymusundi/sturdy-doodle
sebymusundi/TestingGithub
Github tutorial
sebymusundi/trial
sebymusundi/TrimGalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
sebymusundi/trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
sebymusundi/variant_analysis