Pinned Repositories
bdsRNAseqPipeline
RNA-seq pipeline for raw (fastq) file alignment, (if) trimming, (if) count and some other good stuff
bdsSyntaxHighlight
BigDataScript syntax highlight plugin for Vi(m).
BigDataScript
BigDataScript: Scirpting language for big data
bio-ansible
Do bioinformatics not sys-admining - run the playbook and get back to work !
bioconda-recipes
Conda recipes for the bioconda channel.
HeHackSheHack
health hack repository 2015
pybam
Very simple, pure python, BAM file reader
sabre
scripts
a collection of python script for biological data manipulation, including graph ploting, CSV file manipulation and fasta files
serine's Repositories
serine/bio-ansible
Do bioinformatics not sys-admining - run the playbook and get back to work !
serine/HeHackSheHack
health hack repository 2015
serine/pybam
Very simple, pure python, BAM file reader
serine/sabre
serine/BigDataScript
BigDataScript: Scirpting language for big data
serine/bioconda-recipes
Conda recipes for the bioconda channel.
serine/scarlet
Working on PTV timetable data viz and will try optimisation
serine/contoso-chat-proxy
microsoft-ai-summit
serine/d3decompress
serine/dishwasher
playing with arduino
serine/doktor-zhivago
Доктор Живаго
serine/dotfiles
This repository contains my configuration files for happy marriage with vim and bash
serine/fgsea-web
serine/firstpiproject
Simple and quick step by step tutorial introducing Raspberry Pi
serine/googlecl
googlecl is google on command line.
serine/JAFFA
JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions
serine/jira-cli-wrappers
BASH scripts around jira-cli jar file to speed up and simplify access to jira
serine/juicer-modularised
serine/k
serine/linux_notes
Notes about linux, how to configure and fix things
serine/litlog
Helps me track my analysis workflow
serine/ornet
serine/serine
serine/sl
SL(1): Cure your bad habit of mistyping
serine/superFreq
Analysis pipeline for cancer exomes
serine/tcr-dist
Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)
serine/tetris.js
Have fun playing tetris!
serine/tskiril-conda-recipes
conda recipes
serine/utils
Utilities I find useful
serine/variantView
Variant View is a visualization tool for analyzing genetic sequence variants.