Pinned Repositories
TRID
Calculation of TRIple Differentiation
AD_GWAS_PPI
alphafold
Open source code for AlphaFold.
alphafold2
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released
benchmark_VAE
Library for Variational Autoencoder benchmarking
bioinformatics
:microscope: Path to a free self-taught education in Bioinformatics!
CFA
CFA books
De-novo-mutation-identification-in-schizophrenia
GenoCAE
Convolutional autoencoder for genotype data
shannjiang's Repositories
shannjiang/immunoproteasome_project
shannjiang/proteasome_apoe
shannjiang/proteasome
shannjiang/bioinformatics
:microscope: Path to a free self-taught education in Bioinformatics!
shannjiang/netmix2
shannjiang/AD_GWAS_PPI
shannjiang/harmony
Fast, sensitive and accurate integration of single-cell data with Harmony
shannjiang/alphafold2
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released
shannjiang/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
shannjiang/PCReg
Principle Component Regression
shannjiang/structurePPI
structurePPI: Utilities to work with protein structures
shannjiang/benchmark_VAE
Library for Variational Autoencoder benchmarking
shannjiang/psychAD-MSSM
shannjiang/GenoCAE
Convolutional autoencoder for genotype data
shannjiang/shannjiang
Config files for my GitHub profile.
shannjiang/alphafold
Open source code for AlphaFold.
shannjiang/vireo
Demultiplexing pooled scRNA-seq data without genotype reference
shannjiang/hyprcoloc
R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data
shannjiang/CFA
CFA books
shannjiang/Genotype-dimensionality-reduction
A source code to replicate Sakaue S. et al. Nat Commun. 2020.
shannjiang/oncoPPIs
shannjiang/pipgcn
Protein Interface Prediction using Graph Convolutional Networks
shannjiang/De-novo-mutation-identification-in-schizophrenia
shannjiang/hierarchical-hotnet
Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.
shannjiang/OpenCourse
shannjiang/TRID
Calculation of TRIple Differentiation
shannjiang/gumbel-softmax
categorical variational autoencoder using the Gumbel-Softmax estimator