shimbalama/screen_assembly
Screen a bacterial assembly (contigs/CDS or proteins) for nucleotide or protein sequences
PythonMIT
Issues
- 0
pip missing version
#10 opened by shimbalama - 0
run from empty dir
#9 opened by shimbalama - 1
Not making unique seq fasta for AA_seqs_and_ref_nuc local variable 'i' referenced before assignment
#8 opened by jacmm - 5
some protein sequences break script "Not making unique seq fasta for BCAL1869_seqs_and_ref_nuc local variable 'i' referenced before assignment"
#7 opened by BiologicalScientist - 4
name 'iplot' is not defined
#5 opened by BiologicalScientist - 1
extra dependency -MUSCLE
#3 opened by BiologicalScientist - 1
-i option listed in wiki for both INPUT_FOLDER and --percent_identity
#4 opened by BiologicalScientist - 1
test email alert
#6 opened by shimbalama - 0
Plot outside of main thread on Mac
#2 opened by shimbalama - 1
iTOL heatmap
#1 opened by kateworthing