Pinned Repositories
containers-introduction-training
Course website "Docker and Singularity for reproducible research: getting started with containers"
first-steps-with-python-training
repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
first-steps-with-R-training
repository of the 2-day course "First steps with R in Life Sciences" from SIB-training
glittr
A web application for finding and comparing bioinformatics training materials on GitHub and GitLab
intermediate-python-training
intro-bayesian-statistics-training
intro-machine-learning-training
NGS-variants-training
GitHub for the SIB courses NGS - Genome variant analysis
single-cell-training
SIB course on single cell transcriptomics by mostly using the Seurat pipeline
training-collection
Collection of bioinformatics training materials
SIB Swiss Institute of Bioinformatics's Repositories
sib-swiss/training-collection
Collection of bioinformatics training materials
sib-swiss/single-cell-training
SIB course on single cell transcriptomics by mostly using the Seurat pipeline
sib-swiss/intermediate-python-training
sib-swiss/glittr
A web application for finding and comparing bioinformatics training materials on GitHub and GitLab
sib-swiss/containers-introduction-training
Course website "Docker and Singularity for reproducible research: getting started with containers"
sib-swiss/intro-machine-learning-training
sib-swiss/intro-bayesian-statistics-training
sib-swiss/NGS-introduction-training
SIB course that introduces analysis of NGS data
sib-swiss/enrichment-analysis-training
Course material for Enrichment analysis course by SIB
sib-swiss/dsSwissKnife
sib-swiss/kgsteward
Knwowledge Graph Steward - Command line tool to help manage RDF store (GraphDB)
sib-swiss/multiomics-data-analysis-and-integration-training
sib-swiss/dsSwissKnifeClient
sib-swiss/easybuild-easyconfigs
A collection of easyconfig files that describe which software to build using which build options with EasyBuild.
sib-swiss/epinorm
Scripts for processing of disease outbreak records as part of the MOOD project.
sib-swiss/consensusOPLS
sib-swiss/pyrheadb
Repository for the Python package intended to facilitate access to Rhea data from Python
sib-swiss/sib-software-stack
Scripts and documentation to deploy the SIB software stack
sib-swiss/single-cell-python-training
sib-swiss/SPARQL_course
Recon4IMD SPARQL introduction course
sib-swiss/wikidata-orthologs-bot
Bots and scripts to enrich Wikidata using SIB orthologs databases, such as OMA.
sib-swiss/sparql-examples
A set of SPARQL examples that are used in different SIB resources
sib-swiss/course_template
a template for SIB-training course repository (when there is no website attached, otherwise go to https://github.com/sib-swiss/course_website_template )
sib-swiss/ena-seqdata-training
SIB course on interacting with ENA
sib-swiss/epinorm-genbank
Parser for GenBank files
sib-swiss/glittr-stats
General statistics of Glittr.org. Comes with the manuscript.
sib-swiss/opal-docker-sib
sib-swiss/open-data-registry
A registry of publicly available datasets on AWS
sib-swiss/sparql-docs
Instructions on how to document SPARQL endpoints at the SIB
sib-swiss/spatial-transcriptomics-training