Pinned Repositories
borf
ORF prediction using python
branchpointer
branchpointer_dev
Development version of branchpointer
chipenrichfast
Faster version of chipenrich that uses vectorised code and prefiltering of GO terms.
GeneStructureTools
goreparent
R package for grouping GO terms by their common parents
how_are_we_stranded_here
Check strandedness of RNA-Seq fastq files
ipath
Metabolic pathway visualisation with iPath3 in R
ML_caret_example
splice_branchpoints
scripts for Machine-learning annotation of human splicing branchpoints
signalbash's Repositories
signalbash/how_are_we_stranded_here
Check strandedness of RNA-Seq fastq files
signalbash/borf
ORF prediction using python
signalbash/GeneStructureTools
signalbash/ipath
Metabolic pathway visualisation with iPath3 in R
signalbash/branchpointer
signalbash/branchpointer_dev
Development version of branchpointer
signalbash/splice_branchpoints
scripts for Machine-learning annotation of human splicing branchpoints
signalbash/goreparent
R package for grouping GO terms by their common parents
signalbash/ML_caret_example
signalbash/chipenrichfast
Faster version of chipenrich that uses vectorised code and prefiltering of GO terms.
signalbash/2016-01-18-training-prep
signalbash/algae_interface
Flask-based interface to Neo4j database of chemical entity relationships
signalbash/betsig.github.io
signalbash/bioconda-recipes
Conda recipes for the bioconda channel.
signalbash/borf_analysis
Scripts for analysing data for the Borf companion manuscript
signalbash/deep-rules
Ten Quick Tips for Deep Learning in Biology
signalbash/easyascp
Easy use of command line aspera connect (ascp) for ENA downloads
signalbash/elsa
signalbash/fread2
wrapper for fread
signalbash/halpme
Personal R package with functions I use a lot
signalbash/ipath_shiny
Shiny app for interacting with the ipath R package
signalbash/light_penetration_model
signalbash/NOMe_analysis
Scripts for analysing NOMe-Seq data
signalbash/notNMD
signalbash/r-novice-inflammation
Software Carpentry introduction to R for novices using inflammation data.
signalbash/scholar.hasfailed.us
Google Scholar is a trans-exclusionary site. Don't use it. Help us demand change.
signalbash/Shiny_MRTA
signalbash/strandedness_testing_scripts
Scripts for the how_are_we_stranded_here paper