Pinned Repositories
1000Genomes_data_indexes
The index files for sequence and other data created for the 1000 Genomes project and the International Genome Sample Resource
996.ICU
Repo for counting stars and contributing. Press F to pay respect to glorious developers.
abra
Assembly Based ReAligner
active_admin
The administration framework for Ruby on Rails applications.
AdminLTE
AdminLTE - Free Premium Admin control Panel Theme That Is Based On Bootstrap 3.x
alignment-and-variant-calling-tutorial
basic walk-throughs for alignment and variant calling from NGS sequencing data
alipay
An Unofficial Alipay API for Python
alipay-dev-docs
Alipay dev docs downloaded from its official website
seqtk
Toolkit for processing sequences in FASTA/Q formats
simexin's Repositories
simexin/ancestry_pipeline
Provides helper scripts for inferring local ancestry, performing ancestry-specific PCA, etc
simexin/aria2
aria2 is a lightweight multi-protocol & multi-source, cross platform download utility operated in command-line. It supports HTTP/HTTPS, FTP, SFTP, BitTorrent and Metalink.
simexin/ASAR
Advanced metagenomic Sequence Analysis in R
simexin/auto-variant-classification
simexin/bioinformatics-1
Bioinformatics tools developed at Roche NimbleGen
simexin/bioinformatics-2
Tools for bioinformatics
simexin/CAVA
CAVA (Clinical Annotation of VAriants)
simexin/CHM-eval
simexin/deeplearning-biology
A list of deep learning implementations in biology
simexin/DeepSVR
simexin/eutils
simplified searching, fetching, and parsing records from NCBI using their E-utilities interface
simexin/fix-compound-heterozygous
simexin/hgvs-1
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
simexin/hgvs-annotator
simexin/hosts
镜像：https://coding.net/u/scaffrey/p/hosts/git
simexin/imputationserver
Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity
simexin/LiRA
simexin/Merged_RNASeq-course
Pull of course from Autumn school to be merged to new Cam course
simexin/mit-deep-learning
Tutorials, assignments, and competitions for MIT Deep Learning related courses.
simexin/oncokb-public
simexin/OrgChart
It's a simple and direct organization chart plugin. Anytime you want a tree-like chart, you can turn to OrgChart.
simexin/precisionFDA
precisionFDA is a cloud based platform that provides an environment where the community can test, pilot, and benchmark new approaches to validating their next-generation sequencing (NGS) analysis pipelines. PrecisionFDA offers community members a secure and independent work area where, at their discretion, their bioinformatics tools or data can be kept private or shared with the precisionFDA participants.
simexin/rtg-tools
RTG Tools: Utilities for accurate VCF comparison and manipulation
simexin/shadowsocks_install
Auto Install Shadowsocks Server for CentOS/Debian/Ubuntu
simexin/ShadowsocksX-NG
Next Generation of ShadowsocksX
simexin/somaticseq
An ensemble approach to accurately detect somatic mutations using SomaticSeq
simexin/source-han-sans
Source Han Sans | 思源黑体 | 思源黑體 | 思源黑體 香港 | 源ノ角ゴシック | 본고딕
simexin/source-han-serif
Source Han Serif | 思源宋体 | 思源宋體 | 源ノ明朝 | 본명조
simexin/Source-Han-TrueType
TrueType version of Source Han Sans and Source Han Serif, converted by otRebuilder.
simexin/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets