singerma

singerma's Stars

• amplab/snap

  Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data

  Language:C++28766

• benedictpaten/jobTree

  Python based pipeline management software for clusters (but checkout toil: https://github.com/BD2KGenomics/toil, its successor)

  Language:Python2418

• singerma/cgData

  Python API to work with the cgData standard

  Language:Python1

• singerma/gatk

  GATK Changes for TCGA Repository

  Language:Java1

• ucscCancer/cgData

  Python API to work with the cgData standard

  Language:Python88

• broadgsa/gatk

  Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository

  Language:Java295223