sklages

Production Bioinformatics

Pinned Repositories

pycoQC
pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)
Language:Python259 5 9841
wf-human-variation
Language:Nextflow95 14 21842
miso-lims
MISO: An open-source LIMS for NGS sequencing centres
Language:Java247 19 23397
dorado
Oxford Nanopore's Basecaller
Language:C++491 32 1k59
pod5-file-format
Pod5: a high performance file format for nanopore reads.
Language:C++130 27 14218
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Language:Nextflow874 151 644697
amazon-parser
Showing your complete Amazon order history.
Language:JavaScript0 0 00
gitignore
A collection of useful .gitignore templates
00
HASSL_Homogeneous_Analysis_of_SRA_rnaSequencing_Libraries
Language:Python0 1 00
miso-lims
MISO: An open-source LIMS for NGS sequencing centres
Language:Java0 1 00

sklages's Repositories

sklages/amazon-parser
Showing your complete Amazon order history.
Language:JavaScript0 0 00
sklages/gitignore
A collection of useful .gitignore templates
00
sklages/HASSL_Homogeneous_Analysis_of_SRA_rnaSequencing_Libraries
Language:Python0 1 00
sklages/miso-lims
MISO: An open-source LIMS for NGS sequencing centres
Language:Java0 1 00