smlmbrt

smlmbrt's Stars

• academicpages/academicpages.github.io

  Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

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• alshedivat/al-folio

  A beautiful, simple, clean, and responsive Jekyll theme for academics

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• OxWearables/biobankAccelerometerAnalysis

  Extracting meaningful health information from large accelerometer datasets

  Language:Python1972312965

• JonJala/mtag

  Python command line tool for Multi-Trait Analysis of GWAS (MTAG)

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• gabraham/flashpca

  Fast Principal Component Analysis of Large-Scale Genome-Wide Data

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• freeseek/score

  Tools to work with GWAS-VCF summary statistics files

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• rondolab/MR-PRESSO

  Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.

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• immunogenomics/HLA_analyses_tutorial

  A thorough tutorial on HLA imputation and association, accompanying our manuscript "Tutorial: A statistical genetics guide to identifying HLA alleles driving complex disease"

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• Illumina/PrimateAI-3D

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• lcpilling/ukbrapR

  R package for working in the UK Biobank Research Analysis Platform (RAP)

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• nextflow-io/nf-prov

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• jrs95/geni.plots

  GENI plots to visualise results from genome-wide association studies

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• tf2/CNest

  Copy Number Methods for Detection and Genome Wide Association Tests

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• healthdisparities/rye

  :herb: :bread: Large scale ancestry inference from PCA data

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• HL7/genomics-reporting

  Source for the HL7 Genomics work group's "Clinical Genomics-Reporting" FHIR implementation guide

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• mccoy-lab/hgv_modules

  Teaching modules for Human Genome Variation Lab.

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• nf-core/phaseimpute

  A bioinformatics pipeline to phase and impute genetic data

  Language:Nextflow191627615

• EBISPOT/gwas-summary-statistics-standard

  Documentation on new GWAS Summary Statistics Standard

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• medical-genomics-group/gVAMP

  Vector Approximate Message Passing inference framework for GWAS

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• PheWAS/PhecodeX

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• GlenMartin31/Multivariate-Binary-CPMs

  Repo for the paper entitled "Clinical Prediction Models to Predict the Risk of Multiple Binary Outcomes: a comparison of multivariate approaches".

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• ccolonruiz/PRESNER

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• healthdisparities/pastrami

  A method for rapid sub-continental ancestry estimation.

  Language:Python73301

• lb664/MrDAG

  Mendelian randomization (MR) with Bayesian Directed Acyclic (DAG) Graphs exploration

  Language:R5110

• finnlindgren/multiprobit

  R package for multivariate probit regression

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• ComputationalGenomics/FairPRS

  A fairness framework for Polygenic Risk Scores

  Language:Python20

• euffelmann/bpc

  Bayesian polygenic score Probability Conversion (BPC) approach

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• ash-res/mvmr-weakiv

  Weak instrument-robust inference in multivariable Mendelian randomization with two-sample summary data

  Language:R10

• Bamash/pyprobit

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• CNSGenomics/PRS

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