smorabit
Computational Biology Postdoctoral Researcher
@Single-Cell-Genomics-Group-CNAG-CRGBarcelona, Spain
Pinned Repositories
5xFIRE_2021
All scripts for the 5xFADFIRE mouse
abacus-engine
A lightweight OpenGL engine that lets you get up and running faster
Computer-Vision
Scripts and jupyter notebooks associated with CSE152
hdWGCNA
High dimensional weighted gene co-expression network analysis
hdWGCNA_paper
Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
kessenbrock_rotation
lanelab_shinyapps
sus-picasso
Single-nuclei-epigenomic-and-transcriptomic-landscape-in-Alzheimer-disease
Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease
smorabit's Repositories
smorabit/hdWGCNA
High dimensional weighted gene co-expression network analysis
smorabit/hdWGCNA_paper
Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
smorabit/sus-picasso
smorabit/5xFIRE_2021
All scripts for the 5xFADFIRE mouse
smorabit/abacus-engine
A lightweight OpenGL engine that lets you get up and running faster
smorabit/Computer-Vision
Scripts and jupyter notebooks associated with CSE152
smorabit/kessenbrock_rotation
smorabit/lanelab_shinyapps
smorabit/old-site
A beautiful, simple, clean, and responsive Jekyll theme for academics
smorabit/screm
Stochastic bioChemical REaction network simulations using continuous Markov processes (SCREM)
smorabit/smorabit
GitHub profile repository
smorabit/smorabit.github.io
smorabit/spotify_analyst
Some kinda web / python / spotify deal
smorabit/t2dream-portal
The T2DREAM project collects and provides data on the human genome and epigenome to facilitate genetic studies of type 2 diabetes and its complications. The resource is based on software developed by the ENCODE DCC at Stanford University.
smorabit/uci-statnlp
Code for the StatNLP course homework.
smorabit/variant-viz
Embedded Dash app for visualizing relationships between variants, tissues, and functional annotations.
smorabit/vc_tool
Semi supervised learning framework for predicting genetic variants using epigenome features
smorabit/WGCNA
Consensus WGCNA and post-analysis between RNA-seq gene expression data in humans from MAYO clinic, Mt. Sinai, and ROSMAP datasets.
smorabit/winter_2019
Code and scripts for my courses during winter 2019 quarter.