Pinned Repositories
Adaptive_Nanopore_Scripts
Adaptive Nanopore Scripts
Binning_refiner
Improving genome bins through the combination of different binning programs
BioSAK
A Swiss-Army-Knife for Bioinformaticians
HgtSIM
A simulator for horizontal gene transfer (HGT) in microbial communities
MarkerMAG
Linking MAGs with 16S rRNA marker genes
MetaCHIP
Horizontal gene transfer (HGT) identification pipeline
MetaCHIP2
MetaCHIP2
SoftwareCommands
Example commands of some bioinformatic software
Tax4Fun2_short_tutorial
A short tutorial for Tax4Fun2
TreeSAK
A Swiss-Army-Knife for manipulating phylogenetic trees
songweizhi's Repositories
songweizhi/MetaCHIP
Horizontal gene transfer (HGT) identification pipeline
songweizhi/Binning_refiner
Improving genome bins through the combination of different binning programs
songweizhi/MarkerMAG
Linking MAGs with 16S rRNA marker genes
songweizhi/BioSAK
A Swiss-Army-Knife for Bioinformaticians
songweizhi/Tax4Fun2_short_tutorial
A short tutorial for Tax4Fun2
songweizhi/HgtSIM
A simulator for horizontal gene transfer (HGT) in microbial communities
songweizhi/TreeSAK
A Swiss-Army-Knife for manipulating phylogenetic trees
songweizhi/MetaCHIP2
MetaCHIP2
songweizhi/SoftwareCommands
Example commands of some bioinformatic software
songweizhi/songweizhi.github.io
http://songweizhi.github.io
songweizhi/Adaptive_Nanopore_Scripts
Adaptive Nanopore Scripts
songweizhi/bioconda-recipes
Conda recipes for the bioconda channel.
songweizhi/DateArTree
songweizhi/FlowCellBiofilm
Scripts backup for Flow-cell biofilm project
songweizhi/Katana_cmds
some example commands
songweizhi/metaPacBio
Some scripts for the processing of PacBio sequencing data of pooled bacterial genomes
songweizhi/myPyRscript
myPyRscript
songweizhi/ngphylogeny-django
songweizhi/odp
oxford dot plots
songweizhi/Phylogeny_tutorial
songweizhi/PreOGT
Predicting optimal growth temperature
songweizhi/songweizhi
songweizhi/Sponge_Hologenome
Sponge_Hologenome related scripts
songweizhi/toast2018
Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 20th of March 2018.
songweizhi/tutorials
Tutorials on phylogenetic and phylogenomic inference